RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 KLHL4Q9C0H6 718 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 DNAJC28Q9NX36 388 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 GMEB2Q9UKD1 530 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 SLC9A8Q9Y2E8 581 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 C5P01031 1676 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 SNAP91O60641 907 aa10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 ITGA2P17301 1181 aa10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 SLC10A7Q0GE19 358 aa10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 TMED1Q13445 227 aa10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 TCHHL1Q5QJ38 904 aaPredicted RBP10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 C22orf39Q6P5X5 142 aa10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 SPATA19Q7Z5L4 167 aa10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 FAM20CQ8IXL6 584 aa10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 SPOCK2Q92563 424 aa10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 ZNF607Q96SK3 696 aa10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 CDCA3Q99618 268 aaPredicted RBP10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 NOD2Q9HC29 1040 aa10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 SLC2A4RGQ9NR83 387 aa10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 LTBP4Q8N2S1 1624 aa10.27□□□□□ -0.76
NIPAL3-201ENST00000003912 LRRC14BA6NHZ5 514 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 SAC3D1A6NKF1 404 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 PI15O43692 258 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 KCNA5P22460 613 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 VARSP26640 1264 aaKnown RBP10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 C9orf64Q5T6V5 341 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 CST9Q5W186 159 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 ADGRG2Q8IZP9 1017 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 NXNL1Q96CM4 212 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 OR52E6Q96RD3 313 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 CYP2S1Q96SQ9 504 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 NPY6RQ99463 290 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 ADI1Q9BV57 179 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 ROGDIQ9GZN7 287 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 MYLK2Q9H1R3 596 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 NSUN3Q9H649 340 aaKnown RBP10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 IPPKQ9H8X2 491 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 EIF4E1BA6NMX2 242 aaKnown RBP10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 CHURC1-FNTBB4DL54 471 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 PROCP04070 461 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 BPGMP07738 259 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 ADHFE1Q8IWW8 467 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 UNC5BQ8IZJ1 945 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 APOL4Q9BPW4 351 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 RIOK2Q9BVS4 552 aaKnown RBP10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 RERGLQ9H628 205 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 RETREG1Q9H6L5 497 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 TMEM248Q9NWD8 314 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 ZDHHC3Q9NYG2 299 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 MTRRQ9UBK8 725 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 POLR3HQ9Y535 204 aaPredicted RBP10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 UBR2Q8IWV8 1755 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 TEX28O15482 410 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 COCHO43405 550 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 TRBC1P01850 177 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 PCSK2P16519 638 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 ACVRL1P37023 503 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 CCNHP51946 323 aaPredicted RBP10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 IL5RAQ01344 420 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 ANKRD22Q5VYY1 191 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 CAPRIN2Q6IMN6 1127 aaKnown RBP10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 GCNT7Q6ZNI0 430 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 SETD9Q8NE22 299 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 OR4A15Q8NGL6 344 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 RP9Q8TA86 221 aaKnown RBP10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 MARK4Q96L34 752 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 SMG9Q9H0W8 520 aaKnown RBP10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 RSPH9Q9H1X1 276 aaPredicted RBP10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 LRTM1Q9HBL6 345 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 ANAPC2Q9UJX6 822 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 RGSL1A5PLK6 1076 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 LRATO95237 230 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 DLDP09622 509 aaKnown RBP10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 PITRM1Q5JRX3 1037 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 CYP2R1Q6VVX0 501 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 EXOC3L1Q86VI1 746 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 RNF148Q8N7C7 305 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 SMARCD2Q92925 531 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 REXO5Q96IC2 774 aaKnown RBP10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 GSDMCQ9BYG8 508 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 FLRT1Q9NZU1 646 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 ARL5AQ9Y689 179 aa10.27□□□□□ -0.77
NIPAL3-201ENST00000003912 BTAF1O14981 1849 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 A0A1W2PPM1 405 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 OR1F1O43749 312 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 SLC22A3O75751 556 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 CST5P28325 142 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 AVPR1BP47901 424 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF33AQ06730 810 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 FOXM1Q08050 763 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 RFTN2Q52LD8 501 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 TTMPQ5BVD1 217 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 WASHC2DQ5SRD0 308 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 TMEM164Q5U3C3 297 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF783Q6ZMS7 281 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 MRPL10Q7Z7H8 261 aaKnown RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 OR52L1Q8NGH7 329 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 DLG3Q92796 817 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 TMEM245Q9H330 911 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 WDR6Q9NNW5 1121 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms