RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Vmn2r120E9PX34 856 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Calhm3J3QMI4 347 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 FlgP11088 336 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Oas1aP11928 367 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Mthfd2P18155 350 aaKnown RBP9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Npr1P18293 1057 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Slc2a3P32037 493 aaKnown RBP9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Gabrb3P63080 473 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 UcmaQ14BU0 138 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Lrrc58Q3UGP9 366 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Ccdc61Q3UJV1 511 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Dmc1Q61880 340 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Cept1Q8BGS7 416 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Rnf38Q8BI21 518 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 SntnQ8C9X1 147 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Usp45Q8K387 813 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Oas1gQ8K469 367 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Cdhr5Q8VHF2 831 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Depdc7Q91WS7 511 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Arhgef3Q91X46 524 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Dio3Q91ZI8 304 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Nudt7Q99P30 236 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Pole4Q9CQ36 118 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Ccdc77Q9CZH8 489 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Rnf146Q9CZW6 359 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Phrf1A6H619 1682 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Olfr566A0A1B0GST0 319 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Prrg1A2BFE8 218 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Slfn9B1ARD6 910 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 MndalD0QMC3 538 aaKnown RBP9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Daw1D3Z7A5 415 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Gm340F6RGI3 1242 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Bub1O08901 1058 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Smpdl3aP70158 445 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 CkbQ04447 381 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Dusp2Q05922 318 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Dnal1Q05A62 190 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Q5EBG8 199 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 BegainQ68EF6 600 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Dusp11Q6NXK5 321 aaKnown RBP9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Cfap97Q6ZPR1 541 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Dsg1bQ7TSF1 1060 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 MtdhQ80WJ7 579 aaKnown RBP9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Zmiz2Q8CIE2 920 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Vmn1r203Q8R273 311 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Nol6Q8R5K4 1152 aaKnown RBP9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 HnrnpabQ99020 285 aaKnown RBP9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Atp6ap2Q9CYN9 350 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Idh3aQ9D6R2 366 aaKnown RBP9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Ak1Q9R0Y5 194 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Psmd13Q9WVJ2 376 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Il18rapQ9Z2B1 614 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Gm12248A0A1W2P8B8 313 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Kif1cO35071 1100 aaKnown RBP9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Pbx3O35317 434 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Il1aP01582 270 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 TecP24604 630 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Ufm1P61961 85 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 PrkacbP68181 351 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 MafkQ61827 156 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Olfr169Q7TS53 313 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Fstl5Q8BFR2 847 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 R3hcc1lQ8BJM3 775 aaKnown RBP9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Vrk2Q8BN21 503 aaKnown RBP9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Gpat3Q8C0N2 438 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Acsl5Q8JZR0 683 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 ClmpQ8R373 373 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Olfr697Q8VFM4 317 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Olfr348Q8VGK3 313 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 DgkgQ91WG7 788 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Slc24a3Q99PD7 645 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Ndufb5Q9CQH3 189 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Toe1Q9D2E2 511 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Ndufs3Q9DCT2 263 aaKnown RBP9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 D7h11orf16Q9JJR6 402 aa9.41□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Mrgpra2aA0A0R4J1Z0 331 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Olfr1123A2AT85 323 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Galntl6E5D8G1 601 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Ncam2O35136 837 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Limk2O54785 638 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Phkg1P07934 388 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 SirpaP97797 513 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Fnip1Q68FD7 1165 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Thoc7Q7TMY4 204 aaKnown RBP9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Q8BH50 245 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Echs1Q8BH95 290 aaKnown RBP9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Sept8Q8CHH9 429 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Mterf1aQ8CHZ9 379 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Ago1Q8CJG1 857 aaKnown RBP9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Lrrc66Q8K0B3 872 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Cnot3Q8K0V4 751 aaKnown RBP9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Trim31Q8R0K2 507 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Stx19Q8R1Q0 292 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 RhoqQ8R527 205 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Olfr1361Q8VFH0 317 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Sult5a1Q91X36 291 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Gjd3Q91YD1 278 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 4933425L06RikQ9D3Z8 585 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Ddi1Q9DAF3 408 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Hmgn3Q9DCB1 99 aa9.4□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms