RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 DENND6BQ8NEG7 585 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 GPR156Q8NFN8 814 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 SPATA22Q8NHS9 363 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 LMX1AQ8TE12 382 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 NAT6Q93015 286 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 TADA1Q96BN2 335 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 ECHDC3Q96DC8 303 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 RTP4Q96DX8 246 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 IMP4Q96G21 291 aaKnown RBP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 OXNAD1Q96HP4 312 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 TEKT5Q96M29 485 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 SPATA13Q96N96 652 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 KLHL32Q96NJ5 620 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 SMIM14Q96QK8 99 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 RBM15Q96T37 977 aaKnown RBP eCLIP7.39□□□□□ -1.234e-7■■■□□ 17.3
PHGDH-225ENST00000641720 TDRD1Q9BXT4 1180 aaKnown RBP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 OSBPL1AQ9BXW6 950 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 FRMD8P1Q9BZ68 369 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 CPEB1Q9BZB8 566 aaKnown RBP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 SPRY4Q9C004 299 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 POLR1EQ9GZS1 481 aaKnown RBP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 GBA3Q9H227 469 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 ATP13A3Q9H7F0 1226 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 GLOD4Q9HC38 313 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 NCKIPSDQ9NZQ3 722 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 KLHL8Q9P2G9 620 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 AMACRQ9UHK6 382 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 PADI4Q9UM07 663 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 PLAAQ9Y263 795 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 FARP1Q9Y4F1 1045 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 PCDHGC4Q9Y5F7 938 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 SAR1BQ9Y6B6 198 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 SVILO95425 2214 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 AREL1O15033 823 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 HTRA2O43464 458 aaPredicted RBP7.38□□□□□ -1.23
PHGDH-225ENST00000641720 PHF2O75151 1096 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 SOCS5O75159 536 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 KRT38O76015 456 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 MT-CYBP00156 380 aaPredicted RBP7.38□□□□□ -1.23
PHGDH-225ENST00000641720 CPP00450 1065 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 PDHA1P08559 390 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 ZSCAN5DPP0CG00 497 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 ITIH2P19823 946 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 PSMB4P28070 264 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 SERPINA4P29622 427 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 NEK3P51956 506 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 INHBCP55103 352 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 POLE2P56282 527 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 RPS21P63220 83 aaKnown RBP7.38□□□□□ -1.23
PHGDH-225ENST00000641720 BCL2L1Q07817 233 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 ITKQ08881 620 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 KCNAB2Q13303 367 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 CCNG2Q16589 344 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 CYP1B1Q16678 543 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 C4orf17Q53FE4 359 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 ZNF805Q5CZA5 627 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 PRRT3Q5FWE3 981 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 ANKRD20A2Q5SQ80 823 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 FAXCQ5TGI0 409 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 ANKRD20A1Q5TYW2 823 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 ANKRD20A3Q5VUR7 823 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 DRICH1Q6PGQ1 229 aaPredicted RBP7.38□□□□□ -1.23
PHGDH-225ENST00000641720 KDELC1Q6UW63 502 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 BBS5Q8N3I7 341 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 TAB3Q8N5C8 712 aaPredicted RBP7.38□□□□□ -1.23
PHGDH-225ENST00000641720 NKD1Q969G9 470 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 PPP1R16AQ96I34 528 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 TUBGCP5Q96RT8 1024 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 TRIB3Q96RU7 358 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 MLPHQ9BV36 600 aaPredicted RBP7.38□□□□□ -1.23
PHGDH-225ENST00000641720 B3GNT4Q9C0J1 378 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 DDX47Q9H0S4 455 aaKnown RBP7.38□□□□□ -1.23
PHGDH-225ENST00000641720 SLC25A51Q9H1U9 297 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 EPB41L5Q9HCM4 733 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 MBNL1Q9NR56 388 aaKnown RBP7.38□□□□□ -1.23
PHGDH-225ENST00000641720 EVA1BQ9NVM1 165 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 UBP1Q9NZI7 540 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 DKK3Q9UBP4 350 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 APOBEC3BQ9UH17 382 aaKnown RBP7.38□□□□□ -1.23
PHGDH-225ENST00000641720 RSPH14Q9UHP6 348 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 ANAPC2Q9UJX6 822 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 LOXL2Q9Y4K0 774 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 ANKRD12Q6UB98 2062 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 NAV3Q8IVL0 2385 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 PKDREJQ9NTG1 2253 aa7.38□□□□□ -1.23
PHGDH-225ENST00000641720 A0A0U1RQS6 177 aa7.37□□□□□ -1.23
PHGDH-225ENST00000641720 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.37□□□□□ -1.23
PHGDH-225ENST00000641720 CFAP69A5D8W1 941 aa7.37□□□□□ -1.23
PHGDH-225ENST00000641720 C5orf60A6NFR6 353 aa7.37□□□□□ -1.23
PHGDH-225ENST00000641720 IGLON5A6NGN9 336 aa7.37□□□□□ -1.23
PHGDH-225ENST00000641720 H3BM21 787 aa7.37□□□□□ -1.23
PHGDH-225ENST00000641720 K7EM74 188 aa7.37□□□□□ -1.23
PHGDH-225ENST00000641720 FZD6O60353 706 aa7.37□□□□□ -1.23
PHGDH-225ENST00000641720 PMPCBO75439 489 aa7.37□□□□□ -1.23
PHGDH-225ENST00000641720 STK10O94804 968 aaKnown RBP7.37□□□□□ -1.23
PHGDH-225ENST00000641720 PGLSO95336 258 aa7.37□□□□□ -1.23
PHGDH-225ENST00000641720 METTL18O95568 372 aa7.37□□□□□ -1.23
PHGDH-225ENST00000641720 PRLP01236 227 aa7.37□□□□□ -1.23
PHGDH-225ENST00000641720 IFNB1P01574 187 aa7.37□□□□□ -1.23
PHGDH-225ENST00000641720 TIMP2P16035 220 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms