RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 EBF3Q9H4W6 596 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 THG1LQ9NWX6 298 aaKnown RBP17.16■□□□□ 0.34
PHGDH-208ENST00000641023 OBP2AQ9NY56 170 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 PLA2G4CQ9UP65 541 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 TRBV5-4A0A0C4DH59 114 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 CCDC189A1A4V9 331 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 SYCE1LA8MT33 242 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 KERAO60938 352 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 ACRV1P26436 265 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 OR4D1Q15615 310 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 PTRHD1Q6GMV3 140 aaKnown RBP17.15■□□□□ 0.34
PHGDH-208ENST00000641023 GPR149Q86SP6 731 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 AFAP1L2Q8N4X5 818 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 CD200R1Q8TD46 325 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 PBXIP1Q96AQ6 731 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 ATOH8Q96SQ7 321 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 OSBPL1AQ9BXW6 950 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 SHCBP1LQ9BZQ2 653 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 GALPQ9UBC7 116 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 GNPTGQ9UJJ9 305 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 RNF112Q9ULX5 631 aa17.15■□□□□ 0.34
PHGDH-208ENST00000641023 HEPACAM2A8MVW5 462 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 LEFTY1O75610 366 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 SUPT7LO94864 414 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 HNRNPLP14866 589 aaKnown RBP eCLIP17.14■□□□□ 0.33
PHGDH-208ENST00000641023 HERVK_113P63132 956 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 ARHGEF7Q14155 803 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 CHRNA6Q15825 494 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 SLC9B1Q4ZJI4 515 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 SH2D4BQ5SQS7 431 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 ZNF678Q5SXM1 525 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 CYB5D1Q6P9G0 228 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 FRMD7Q6ZUT3 714 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 C12orf40Q86WS4 652 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 GPR26Q8NDV2 337 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 EXT2Q93063 718 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 ERVK-6Q9BXR3 956 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 SARS2Q9NP81 518 aaKnown RBP17.14■□□□□ 0.33
PHGDH-208ENST00000641023 TCF7L2Q9NQB0 619 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 IL36AQ9UHA7 158 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 WASF2Q9Y6W5 498 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 CYP2A6P11509 494 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-208ENST00000641023 ZNF30P17039 623 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 UGT1A6P19224 532 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 UGT1A1P22309 533 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 UGT1A4P22310 534 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 LHCGRP22888 699 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 UGT1A3P35503 534 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 UGT1A5P35504 534 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 ELF3P78545 371 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-208ENST00000641023 SEMG2Q02383 582 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 ARSIQ5FYB1 569 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 ETFBKMTQ8IXQ9 262 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 STON2Q8WXE9 905 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 FAR2Q96K12 515 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 ZFYVE19Q96K21 471 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 PLEKHG4BQ96PX9 1271 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 ASB2Q96Q27 587 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 SLC30A3Q99726 388 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 APOL5Q9BWW9 433 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 TRPV4Q9HBA0 871 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 ELOVL2Q9NXB9 296 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 GTSE1Q9NYZ3 720 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 DEC1Q9P2X7 70 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 B4GALT6Q9UBX8 382 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 DHRS7Q9Y394 339 aa17.14■□□□□ 0.33
PHGDH-208ENST00000641023 AGAP14A8MT82 685 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 BTN3A1O00481 513 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 KRT16P08779 473 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 MTHFD2P13995 350 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 GFAPP14136 432 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 ARSAP15289 507 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 AOC1P19801 751 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 NCF2P19878 526 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-208ENST00000641023 CLCN7P51798 805 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 UBAP2LQ14157 1087 aaKnown RBP17.13■□□□□ 0.33
PHGDH-208ENST00000641023 PFKFB4Q16877 469 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 ACAD11Q709F0 780 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 NXPE1Q8N323 547 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 PTGR2Q8N8N7 351 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-208ENST00000641023 KDM1BQ8NB78 822 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 MAPK15Q8TD08 544 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 EEF1AKMT1Q8WVE0 214 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 MRPL38Q96DV4 380 aaKnown RBP17.13■□□□□ 0.33
PHGDH-208ENST00000641023 FAM83CQ9BQN1 747 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 BTBD10Q9BSF8 475 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 TBC1D10AQ9BXI6 508 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 NUF2Q9BZD4 464 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 KLC4Q9NSK0 619 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 TAGLN3Q9UI15 199 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 STK38LQ9Y2H1 464 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 TRANK1O15050 2925 aa17.13■□□□□ 0.33
PHGDH-208ENST00000641023 EPOPA6NHQ4 379 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 TRPC5OSA6NMA1 111 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 IQCF5A8MTL0 148 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 PRR5-ARHGAP8B1AHC4 643 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 UBXN8O00124 270 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 GRID2O43424 1007 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 TSPAN12O95859 305 aa17.12■□□□□ 0.33
PHGDH-208ENST00000641023 ENO1P06733 434 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms