RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 GPR89AB7ZAQ6 455 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 H7C0C1 242 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 GPR89BP0CG08 455 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 ACP5P13686 325 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 CETN2P41208 172 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 FASLGP48023 281 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 ATP5OP48047 213 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 VAV2P52735 878 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 CXADRP78310 365 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 SOWAHCQ53LP3 525 aaPredicted RBP24.95■■□□□ 1.58
VEGFA-232ENST00000640653 KDELC1Q6UW63 502 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 GPR155Q7Z3F1 870 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 TMPRSS9Q7Z410 1059 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 JAMLQ86YT9 394 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 SLC37A2Q8TED4 501 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 GLYATL1Q969I3 302 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 UBL7Q96S82 380 aaPredicted RBP24.95■■□□□ 1.58
VEGFA-232ENST00000640653 STN1Q9H668 368 aaKnown RBP24.95■■□□□ 1.58
VEGFA-232ENST00000640653 TRIM39Q9HCM9 518 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 ATXN10Q9UBB4 475 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 PISDQ9UG56 409 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 REXO2Q9Y3B8 237 aaKnown RBP24.95■■□□□ 1.58
VEGFA-232ENST00000640653 SPO11Q9Y5K1 396 aa24.95■■□□□ 1.58
VEGFA-232ENST00000640653 ARHGEF17Q96PE2 2063 aaPredicted RBP24.95■■□□□ 1.58
VEGFA-232ENST00000640653 HGFP14210 728 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 HOXB3P14651 431 aaPredicted RBP24.94■■□□□ 1.58
VEGFA-232ENST00000640653 SLC2A4P14672 509 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 BPIP17213 487 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 CTNNA2P26232 953 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 MPP3Q13368 585 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 NOMO1Q15155 1222 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 USP53Q70EK8 1073 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 KIAA1328Q86T90 577 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 SFRP1Q8N474 314 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 ACRBPQ8NEB7 543 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 MRGPRX2Q96LB1 330 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 PLEKHG4BQ96PX9 1271 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 BAG1Q99933 345 aaPredicted RBP24.94■■□□□ 1.58
VEGFA-232ENST00000640653 DPYSL5Q9BPU6 564 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 NUDT22Q9BRQ3 303 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 OR2AG1Q9H205 316 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 SEMA6CQ9H3T2 930 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 KCNK4Q9NYG8 393 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.94■■□□□ 1.58
VEGFA-232ENST00000640653 HACD3Q9P035 362 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 RSPH14Q9UHP6 348 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 KCNK6Q9Y257 313 aa24.94■■□□□ 1.58
VEGFA-232ENST00000640653 F5H423 210 aaPredicted RBP24.93■■□□□ 1.58
VEGFA-232ENST00000640653 PJA2O43164 708 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 ZNF8P17098 575 aaPredicted RBP24.93■■□□□ 1.58
VEGFA-232ENST00000640653 HLA-DPA1P20036 260 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 CD1CP29017 333 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 SLC5A2P31639 672 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 PTPN7P35236 360 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 HMGCLP35914 325 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 RWDD2BP57060 319 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 GPLD1P80108 840 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 SIRPB2Q5JXA9 342 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 GAS2L3Q86XJ1 694 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 TXLNBQ8N3L3 684 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 SLC25A41Q8N5S1 370 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 IPMKQ8NFU5 416 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 OXNAD1Q96HP4 312 aaPredicted RBP24.93■■□□□ 1.58
VEGFA-232ENST00000640653 SLC38A3Q99624 504 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 HERPUD2Q9BSE4 406 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 OSBPL8Q9BZF1 889 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 LACRTQ9GZZ8 138 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 ARFGAP3Q9NP61 516 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 TBC1D29Q9UFV1 150 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 ZFYVE26Q68DK2 2539 aa24.93■■□□□ 1.58
VEGFA-232ENST00000640653 TRBV23OR9-2A0A075B6M9 112 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 IGHV1OR21-1A0A087WYE8 117 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 TEX51A0A1B0GUA7 166 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 MACROD2A1Z1Q3 448 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 AURKAO14965 403 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 RBL1P28749 1068 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 SQSTM1Q13501 440 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 SLC1A5Q15758 541 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 ZDHHC20Q5W0Z9 365 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 ITPRIPL1Q6GPH6 555 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 ADGRG6Q86SQ4 1221 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 CDKL3Q8IVW4 592 aaPredicted RBP24.92■■□□□ 1.58
VEGFA-232ENST00000640653 FSD1LQ9BXM9 530 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 ZMYND15Q9H091 742 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 BPIFA1Q9NP55 256 aa24.92■■□□□ 1.58
VEGFA-232ENST00000640653 EIF4E1BA6NMX2 242 aaKnown RBP24.91■■□□□ 1.58
VEGFA-232ENST00000640653 HGSO14964 777 aaPredicted RBP24.91■■□□□ 1.58
VEGFA-232ENST00000640653 NVLO15381 856 aaKnown RBP24.91■■□□□ 1.58
VEGFA-232ENST00000640653 VEGFDO43915 354 aa24.91■■□□□ 1.58
VEGFA-232ENST00000640653 SNX2O60749 519 aa24.91■■□□□ 1.58
VEGFA-232ENST00000640653 EML2O95834 649 aa24.91■■□□□ 1.58
VEGFA-232ENST00000640653 ITIH1P19827 911 aa24.91■■□□□ 1.58
VEGFA-232ENST00000640653 PPM1FP49593 454 aaPredicted RBP24.91■■□□□ 1.58
VEGFA-232ENST00000640653 OTUD4Q01804 1114 aaKnown RBP24.91■■□□□ 1.58
VEGFA-232ENST00000640653 HHEXQ03014 270 aa24.91■■□□□ 1.58
VEGFA-232ENST00000640653 TRA2AQ13595 282 aaKnown RBP eCLIP24.91■■□□□ 1.581e-8■■□□□ 12.8
VEGFA-232ENST00000640653 ZNF648Q5T619 568 aaPredicted RBP24.91■■□□□ 1.58
VEGFA-232ENST00000640653 IYDQ6PHW0 289 aa24.91■■□□□ 1.58
VEGFA-232ENST00000640653 SLC9B2Q86UD5 537 aa24.91■■□□□ 1.58
VEGFA-232ENST00000640653 AVL9Q8NBF6 648 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms