RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 NAIF1Q69YI7 327 aaPredicted RBP18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 NKAPQ8N5F7 415 aaKnown RBP18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 SPDYE1Q8NFV5 336 aaPredicted RBP18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 SLC45A3Q96JT2 553 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 CNBD2Q96M20 576 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 CWH43Q9H720 699 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 C2orf78A6NCI8 922 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 CSPG5O95196 566 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 TSPAN12O95859 305 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 PYGLP06737 847 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 ZNF26P17031 533 aaPredicted RBP18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 CES1P23141 567 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 POLE2P56282 527 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 USP41Q3LFD5 358 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 HERC6Q8IVU3 1022 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 ZNF483Q8TF39 744 aaPredicted RBP18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 EEF1AKMT1Q8WVE0 214 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 GPATCH1Q9BRR8 931 aaKnown RBP18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 PAPOLBQ9NRJ5 636 aaKnown RBP18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 TRPM5Q9NZQ8 1165 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 OGDHLQ9ULD0 1010 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 MICAL3Q7RTP6 2002 aa18.78■□□□□ 0.6
CROCCP2-206ENST00000639594 ZFC3H1O60293 1989 aaKnown RBP18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 SYCE1LA8MT33 242 aa18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 VPS26AO75436 327 aa18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 TMCC1O94876 653 aa18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 SMIM18P0DKX4 95 aa18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 UGT3A1Q6NUS8 523 aa18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 SYVN1Q86TM6 617 aa18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 TTC30BQ8N4P2 665 aa18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 ESAMQ96AP7 390 aa18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 DUS3LQ96G46 650 aaKnown RBP18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 SCLYQ96I15 445 aa18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 SPATA16Q9BXB7 569 aa18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 KLF16Q9BXK1 252 aaPredicted RBP18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 ADGRE3Q9BY15 652 aa18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 ZNF225Q9UK10 706 aa18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 NDUFAF1Q9Y375 327 aa18.77■□□□□ 0.6
CROCCP2-206ENST00000639594 NME4O00746 187 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 SCAMP3O14828 347 aaKnown RBP18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 STX7O15400 261 aaKnown RBP18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 KLK8O60259 260 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 CRCPO75575 148 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 EFEMP2O95967 443 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 SLC7A1P30825 629 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 TTPAP49638 278 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 HK3P52790 923 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 ATN1P54259 1190 aaPredicted RBP18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 YBX1P67809 324 aaKnown RBP18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 CNPY1Q3B7I2 92 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 DHFR2Q86XF0 187 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 RIN3Q8TB24 985 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 EME1Q96AY2 570 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 CEP295NLQ96MC4 621 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 CLSTN3Q9BQT9 956 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 SDR39U1Q9NRG7 319 aaPredicted RBP18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 TRMT6Q9UJA5 497 aaKnown RBP18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 PCTPQ9UKL6 214 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 CNOT11Q9UKZ1 510 aaKnown RBP18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 STX16O14662 325 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 PQBP1O60828 265 aaKnown RBP18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 MATN4O95460 622 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 C1RP00736 705 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 MZF1P28698 734 aaPredicted RBP18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 MNX1P50219 401 aaPredicted RBP18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 DIO3P55073 304 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 PLD1Q13393 1074 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 MAP7D1Q3KQU3 841 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 NCEH1Q6PIU2 408 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 SLC30A9Q6PML9 568 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 LRRC43Q8N309 656 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 CD200R1Q8TD46 325 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 LINGO1Q96FE5 620 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 COQ10BQ9H8M1 238 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 VPS9D1Q9Y2B5 631 aa18.76■□□□□ 0.59
CROCCP2-206ENST00000639594 ANGPT2O15123 496 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 GPR39O43194 453 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 PGM3O95394 542 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 HSPA13P48723 471 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 ALDH7A1P49419 539 aaKnown RBP18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 IRX1P78414 480 aaPredicted RBP18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 RPS6KA2Q15349 733 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 NRF1Q16656 503 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 HMBOX1Q6NT76 420 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 AMIGO2Q86SJ2 522 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 FAM110BQ8TC76 370 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 HOPXQ9BPY8 73 aaPredicted RBP18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 C1QTNF3Q9BXJ4 246 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 SLC52A3Q9NQ40 469 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 SMPD4Q9NXE4 827 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 HACD3Q9P035 362 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 LHX3Q9UBR4 397 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 AFF4Q9UHB7 1163 aaKnown RBP18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 ASB1Q9Y576 335 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 SNX13Q9Y5W8 968 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 GPR45Q9Y5Y3 372 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 BACE2Q9Y5Z0 518 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 KIAA0100Q14667 2235 aaKnown RBP18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 OBSL1O75147 1896 aa18.75■□□□□ 0.59
CROCCP2-206ENST00000639594 C7orf72A4D263 438 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms