RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 CAPN1P07384 714 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 ACVRL1P37023 503 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 LSM3P62310 102 aaKnown RBP14.27□□□□□ -0.13
SCARB2-208ENST00000638372 CHST9Q7L1S5 443 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 IGDCC3Q8IVU1 814 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 OR8H2Q8N162 312 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 ZBTB2Q8N680 514 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 KRCC1Q9NPI7 259 aaPredicted RBP14.27□□□□□ -0.13
SCARB2-208ENST00000638372 COPG1Q9Y678 874 aaKnown RBP14.27□□□□□ -0.13
SCARB2-208ENST00000638372 LOC100506127A0A0U1RQW1 187 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 H0YGN5 161 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 PIP5K1BO14986 540 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 GJA1P17302 382 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 GSTT1P30711 240 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 NTSP30990 170 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 MRPL28Q13084 256 aaKnown RBP14.27□□□□□ -0.13
SCARB2-208ENST00000638372 PLA2G4EQ3MJ16 856 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 SLC9A4Q6AI14 798 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 SVOPQ8N4V2 548 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 KCTD13Q8WZ19 329 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 CXorf40BQ96DE9 158 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 HOPXQ9BPY8 73 aaPredicted RBP14.27□□□□□ -0.13
SCARB2-208ENST00000638372 SLC2A6Q9UGQ3 507 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 NFS1Q9Y697 457 aa14.27□□□□□ -0.13
SCARB2-208ENST00000638372 SIX3O95343 332 aaPredicted RBP14.26□□□□□ -0.13
SCARB2-208ENST00000638372 ADH1CP00326 375 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 GLYATQ6IB77 296 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 NELL1Q92832 810 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 USP7Q93009 1102 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 RPS6KA6Q9UK32 745 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 GMPPBQ9Y5P6 360 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 WASF2Q9Y6W5 498 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 CITO14578 2027 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 POLR2JP52435 117 aaKnown RBP14.26□□□□□ -0.13
SCARB2-208ENST00000638372 USP46P62068 366 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 CHMP1BQ7LBR1 199 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 DNAJB7Q7Z6W7 309 aaPredicted RBP14.26□□□□□ -0.13
SCARB2-208ENST00000638372 GATAD2AQ86YP4 633 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 OSBPL2Q9H1P3 480 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 TBC1D14Q9P2M4 693 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 ADGRE2Q9UHX3 823 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 NUP188Q5SRE5 1749 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 CCND3P30281 292 aaPredicted RBP14.26□□□□□ -0.13
SCARB2-208ENST00000638372 RPL5P46777 297 aaKnown RBP14.26□□□□□ -0.13
SCARB2-208ENST00000638372 ST13P50502 369 aaKnown RBP14.26□□□□□ -0.13
SCARB2-208ENST00000638372 CCR4P51679 360 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 PAQR3Q6TCH7 311 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 KBTBD2Q8IY47 623 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 PGAM4Q8N0Y7 254 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 TERB1Q8NA31 727 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 FAM192AQ9GZU8 254 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 HS3ST4Q9Y661 456 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 TBC1D3DA0A087WVF3 549 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 TBC1D3IA0A087WXS9 549 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 TBC1D3EA0A087X179 549 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 TBC1D3KA0A087X1G2 549 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 A0A1W2PRU2 124 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 TBC1D3FA6NER0 549 aaPredicted RBP14.26□□□□□ -0.13
SCARB2-208ENST00000638372 TBC1D3LB9A6J9 549 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 NBNO60934 754 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 GUCY1B2O75343 617 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 TBC1D3HP0C7X1 549 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 ZNF37AP17032 561 aaPredicted RBP14.26□□□□□ -0.13
SCARB2-208ENST00000638372 AP1S1P61966 158 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 SLC44A4Q53GD3 710 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 TBC1D3GQ6DHY5 549 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 TBC1D3CQ6IPX1 549 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 ABRAXAS1Q6UWZ7 409 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 TBC1D3Q8IZP1 549 aaPredicted RBP14.26□□□□□ -0.13
SCARB2-208ENST00000638372 RAD21L1Q9H4I0 556 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 CYTH4Q9UIA0 394 aa14.26□□□□□ -0.13
SCARB2-208ENST00000638372 EPHX1P07099 455 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 NR2F1P10589 423 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 UGT1A6P19224 532 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 PAICSP22234 425 aaKnown RBP14.25□□□□□ -0.13
SCARB2-208ENST00000638372 UGT1A1P22309 533 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 UGT1A4P22310 534 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 UGT1A3P35503 534 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 UGT1A5P35504 534 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 SOX4Q06945 474 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-208ENST00000638372 KLF1Q13351 362 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-208ENST00000638372 SLC9B1Q4ZJI4 515 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 FAM46CQ5VWP2 391 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 TXNDC8Q6A555 127 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 PARP8Q8N3A8 854 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 ITCHQ96J02 903 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 SGK2Q9HBY8 427 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 DNAJC11Q9NVH1 559 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 ZMYND8Q9ULU4 1186 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-208ENST00000638372 C5P01031 1676 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 FAM159BA6NKW6 160 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 NIPSNAP2O75323 286 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 WFS1O76024 890 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 AHSGP02765 367 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 CYP4B1P13584 511 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 KIR3DL1P43629 444 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 DGKKQ5KSL6 1271 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 SFRP1Q8N474 314 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 AADATQ8N5Z0 425 aa14.25□□□□□ -0.13
SCARB2-208ENST00000638372 CNTD1Q8N815 330 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms