RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 DCAF15Q66K64 600 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ARMC6Q6NXE6 501 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 GDPD3Q7L5L3 318 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 RTL3Q8N8U3 475 aaKnown RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ARRDC4Q8NCT1 418 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 RDM1Q8NG50 284 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 S100PBPQ96BU1 408 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ERMAPQ96PL5 475 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 FYTTD1Q96QD9 318 aaKnown RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 DPYSL5Q9BPU6 564 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 SLC30A2Q9BRI3 323 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 DBNDD1Q9H9R9 158 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 RSAD1Q9HA92 442 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 PRDM5Q9NQX1 630 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 FAM217BQ9NTX9 383 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ASH2LQ9UBL3 628 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 KLHL21Q9UJP4 597 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ZNRF3Q9ULT6 936 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 MAGEB6P1A0A0J9YX57 407 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 FAM155AB1AL88 458 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 E5RJQ4 531 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 H3BM21 787 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 GSTA4O15217 222 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ERN1O75460 977 aaKnown RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 CYP7B1O75881 506 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 NR3C1P04150 777 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 GNAO1P09471 354 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 THRBP10828 461 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 CD36P16671 472 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 CD58P19256 250 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 RAB4AP20338 218 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 CNTFP26441 200 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 SFNP31947 248 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 TMEM132BQ14DG7 1078 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 PIGGQ5H8A4 983 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 AADACL4Q5VUY2 407 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 TMPRSS11AQ6ZMR5 421 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ZNF782Q6ZMW2 699 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ADGRD2Q7Z7M1 963 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ZDHHC13Q8IUH4 622 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ATPAF2Q8N5M1 289 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 TTC29Q8NA56 475 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 TAS1R2Q8TE23 839 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 LGALS12Q96DT0 336 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 SERAC1Q96JX3 654 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ZSCAN10Q96SZ4 725 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 RIBC2Q9H4K1 309 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 C14orf119Q9NWQ9 140 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 VPS28Q9UK41 221 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 TRHDEQ9UKU6 1024 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 OAZ3Q9UMX2 235 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 MFHAS1Q9Y4C4 1052 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 MROH5Q6ZUA9 1318 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 IGSF1Q8N6C5 1336 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 CNTNAP1P78357 1384 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 SYN3O14994 580 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 SLC16A3O15427 465 aaKnown RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 C1QBP02746 253 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 MMP10P09238 476 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ERVK-10P10266 1014 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 BMP2P12643 396 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 AZGP1P25311 298 aaKnown RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ELK4P28324 431 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 CD6P30203 668 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 GABRB2P47870 512 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 RGS19P49795 217 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 GZMKP49863 264 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 CYP2J2P51589 502 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 MAZP56270 477 aaKnown RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 GABARAPL2P60520 117 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 RPS7P62081 194 aaKnown RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 DYNLT1P63172 113 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 EN1Q05925 392 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 GALNT2Q10471 571 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 CEACAM7Q14002 265 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 FGFBP1Q14512 234 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 PDIA6Q15084 440 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 COL28A1Q2UY09 1125 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 SLC36A3Q495N2 470 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 NHSL2Q5HYW2 709 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ANGEL2Q5VTE6 544 aaKnown RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 IL31Q6EBC2 164 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 LETMD1Q6P1Q0 360 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 POMZP3Q6PJE2 187 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 KCNT2Q6UVM3 1135 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 SYVN1Q86TM6 617 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 FBXO11Q86XK2 927 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ADGRG3Q86Y34 549 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 VWA5B2Q8N398 1253 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 PHTF2Q8N3S3 785 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 ZNF781Q8N8C0 355 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 MCUQ8NE86 351 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 FAM83FQ8NEG4 500 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 AKR7LQ8NHP1 331 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 UTP15Q8TED0 518 aaKnown RBP5.71□□□□□ -1.5
SCN1A-216ENST00000637968 CHAC2Q8WUX2 184 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 NXPE3Q969Y0 559 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 CPXM1Q96SM3 734 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 NPAS2Q99743 824 aa5.71□□□□□ -1.5
SCN1A-216ENST00000637968 HDHD5Q9BXW7 423 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms