RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 SLC30A3Q99726 388 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 THTPAQ9BU02 230 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 C1QTNF3Q9BXJ4 246 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 DHRS7Q9Y394 339 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 NUP210Q8TEM1 1887 aaPredicted RBP21.89■■□□□ 1.1
PNKP-220ENST00000627232 MEI4A8MW99 385 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 SUPT3HB4E1H0 165 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 UBFD1O14562 309 aaKnown RBP21.89■■□□□ 1.09
PNKP-220ENST00000627232 SUPT3HO75486 399 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 ECI2O75521 394 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 TYRP14679 529 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 CHRM3P20309 590 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 SPAM1P38567 509 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 PFKFB4Q16877 469 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 TXNDC11Q6PKC3 985 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 FAM151BQ6UXP7 276 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 CHSY3Q70JA7 882 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 RPS27LQ71UM5 84 aaKnown RBP21.89■■□□□ 1.09
PNKP-220ENST00000627232 ZSWIM9Q86XI8 627 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 CLYBLQ8N0X4 340 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 PELI3Q8N2H9 469 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 KIAA1958Q8N8K9 716 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 GIMAP7Q8NHV1 300 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 FUBP1Q96AE4 644 aaKnown RBP21.89■■□□□ 1.09
PNKP-220ENST00000627232 SCRN2Q96FV2 425 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 LENG8Q96PV6 779 aaPredicted RBP21.89■■□□□ 1.09
PNKP-220ENST00000627232 CLPBQ9H078 707 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 ASB8Q9H765 288 aa21.89■■□□□ 1.09
PNKP-220ENST00000627232 NOP53Q9NZM5 478 aaKnown RBP21.89■■□□□ 1.09
PNKP-220ENST00000627232 GLYATL1P3A0A0U1RQE8 302 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 ENTPD5O75356 428 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 BPIP17213 487 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 CLCN7P51798 805 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 CCNHP51946 323 aaPredicted RBP21.88■■□□□ 1.09
PNKP-220ENST00000627232 NTHL1P78549 312 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 NFATC2Q13469 925 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 KPNB1Q14974 876 aaKnown RBP21.88■■□□□ 1.09
PNKP-220ENST00000627232 TSNQ15631 228 aaKnown RBP21.88■■□□□ 1.09
PNKP-220ENST00000627232 ZRSR2Q15696 482 aaKnown RBP21.88■■□□□ 1.09
PNKP-220ENST00000627232 TRMT5Q32P41 509 aaKnown RBP21.88■■□□□ 1.09
PNKP-220ENST00000627232 LY6G5CQ5SRR4 150 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 WLSQ5T9L3 541 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 USP45Q70EL2 814 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 LINGO1Q96FE5 620 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 CATSPER2Q96P56 530 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 MCCC1Q96RQ3 725 aaPredicted RBP21.88■■□□□ 1.09
PNKP-220ENST00000627232 LINC00597Q9H2U6 94 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 TNFRSF12AQ9NP84 129 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 IL26Q9NPH9 171 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 GNPTGQ9UJJ9 305 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 IKZF3Q9UKT9 509 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 L3MBTL1Q9Y468 752 aa21.88■■□□□ 1.09
PNKP-220ENST00000627232 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.88■■□□□ 1.09
PNKP-220ENST00000627232 NPEPPSL1A6NEC2 478 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 WASH3PC4AMC7 463 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 CDC7O00311 574 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 BTN3A1O00481 513 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 ACRV1P26436 265 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 SLC25A3Q00325 362 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 CUL3Q13618 768 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 ACCSLQ4AC99 568 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 CRTC1Q6UUV9 634 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 GRASPQ7Z6J2 395 aaPredicted RBP21.87■■□□□ 1.09
PNKP-220ENST00000627232 ADIPOR2Q86V24 386 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 ADGRG2Q8IZP9 1017 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 AHI1Q8N157 1196 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 EEF1AKMT1Q8WVE0 214 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 ZNF707Q96C28 371 aaPredicted RBP21.87■■□□□ 1.09
PNKP-220ENST00000627232 SAMD11Q96NU1 681 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 EBF2Q9HAK2 575 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 ZBTB26Q9HCK0 441 aa21.87■■□□□ 1.09
PNKP-220ENST00000627232 A0A088AWK7 358 aa21.86■■□□□ 1.09
PNKP-220ENST00000627232 LOC100653049A0A140TA62 436 aa21.86■■□□□ 1.09
PNKP-220ENST00000627232 NPIPB15A6NHN6 443 aaPredicted RBP21.86■■□□□ 1.09
PNKP-220ENST00000627232 AGAP14A8MT82 685 aa21.86■■□□□ 1.09
PNKP-220ENST00000627232 SKAP2O75563 359 aaPredicted RBP21.86■■□□□ 1.09
PNKP-220ENST00000627232 KRT34O76011 436 aa21.86■■□□□ 1.09
PNKP-220ENST00000627232 RPS17P08708 135 aaKnown RBP21.86■■□□□ 1.09
PNKP-220ENST00000627232 ITGAXP20702 1163 aa21.86■■□□□ 1.09
PNKP-220ENST00000627232 KHDC1Q4VXA5 237 aaKnown RBP21.86■■□□□ 1.09
PNKP-220ENST00000627232 ZDHHC20Q5W0Z9 365 aa21.86■■□□□ 1.09
PNKP-220ENST00000627232 ANKS6Q68DC2 871 aa21.86■■□□□ 1.09
PNKP-220ENST00000627232 PTRHD1Q6GMV3 140 aaKnown RBP21.86■■□□□ 1.09
PNKP-220ENST00000627232 DPY19L3Q6ZPD9 716 aa21.86■■□□□ 1.09
PNKP-220ENST00000627232 WDR60Q8WVS4 1066 aa21.86■■□□□ 1.09
PNKP-220ENST00000627232 ZSWIM3Q96MP5 696 aa21.86■■□□□ 1.09
PNKP-220ENST00000627232 FIS1Q9Y3D6 152 aa21.86■■□□□ 1.09
PNKP-220ENST00000627232 CDK14O94921 469 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 ARHGEF15O94989 841 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 SIX3O95343 332 aaPredicted RBP21.85■■□□□ 1.09
PNKP-220ENST00000627232 CEBPBP17676 345 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 EEF1DP29692 281 aaKnown RBP21.85■■□□□ 1.09
PNKP-220ENST00000627232 WEE1P30291 646 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 VASPP50552 380 aaPredicted RBP21.85■■□□□ 1.09
PNKP-220ENST00000627232 C1QTNF8P60827 252 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 CYLC2Q14093 348 aaPredicted RBP21.85■■□□□ 1.09
PNKP-220ENST00000627232 E2F5Q15329 346 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 CHRNA6Q15825 494 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 UGT3A2Q3SY77 523 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 PREPLQ4J6C6 727 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms