RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 C1QTNF2Q9BXJ5 285 aa17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 SLC17A9Q9BYT1 436 aa17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 SPATA6Q9NWH7 488 aaPredicted RBP17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 MTO1Q9Y2Z2 717 aaKnown RBP17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 CACNA1IQ9P0X4 2223 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 HMX2A2RU54 273 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 AGAP14A8MT82 685 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 OR1I1O60431 355 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 PAK4O96013 591 aaPredicted RBP17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 GPR1P46091 355 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 FGL2Q14314 439 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 MAP7D1Q3KQU3 841 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 KCTD16Q68DU8 428 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 PELI3Q8N2H9 469 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 GPATCH11Q8N954 259 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 FAM76AQ8TAV0 307 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 GDAP1Q8TB36 358 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 RLN3Q8WXF3 142 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 LPGAT1Q92604 370 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 MTBPQ96DY7 904 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 ATP6V1G3Q96LB4 118 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 SMOXQ9NWM0 555 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 TMPRSS11EQ9UL52 423 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 NOVA2Q9UNW9 492 aaKnown RBP17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 PIKFYVEQ9Y2I7 2098 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 K7ESM1 405 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 PCCBP05166 539 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 CD6P30203 668 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 PTGER3P43115 390 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 CLCN5P51795 746 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 LRRC14Q15048 493 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 AGERQ15109 404 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 WSCD2Q2TBF2 565 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 MAMSTRQ6ZN01 415 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 TRIM69Q86WT6 500 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 DCLK2Q8N568 766 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 MZB1Q8WU39 189 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 ELMO2Q96JJ3 720 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 GPR22Q99680 433 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 C1QTNF7Q9BXJ2 289 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 ZDHHC3Q9NYG2 299 aa17.67■□□□□ 0.42
PTCHD3-202ENST00000622555 VCANP13611 3396 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 FAM95CA0A1B0GW59 222 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 K7ESF4 209 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 INPP4BO15327 924 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 SOD1P00441 154 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 MT-ND3P03897 115 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 ZNF7P17097 686 aaPredicted RBP17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 SAT1P21673 171 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 FMO4P31512 558 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 TNFAIP8L3Q5GJ75 292 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 RBM20Q5T481 1227 aaKnown RBP17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 GPRC6AQ5T6X5 926 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 ZNF771Q7L3S4 317 aaPredicted RBP17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 TRABD2AQ86V40 505 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 NLRP8Q86W28 1048 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 SRRM1Q8IYB3 904 aaKnown RBP17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 RBFAQ8N0V3 343 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 CNPY4Q8N129 248 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 FAM160A2Q8N612 972 aaPredicted RBP17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 BTN2A2Q8WVV5 523 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 GLYATL1Q969I3 302 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 VPS35Q96QK1 796 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 NDNQ99608 321 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 COPS8Q99627 209 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 BOCQ9BWV1 1114 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 CCDC68Q9H2F9 335 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 WSB2Q9NYS7 404 aaPredicted RBP17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 SLC39A10Q9ULF5 831 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 TTC28Q96AY4 2481 aa17.66■□□□□ 0.42
PTCHD3-202ENST00000622555 EML5Q05BV3 1969 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 PLXND1Q9Y4D7 1925 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 IGHV1OR15-9A0A0B4J2B8 117 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 A0A1W2PPM1 405 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 HMGB1P1B2RPK0 211 aaPredicted RBP17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 SLC31A1O15431 190 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 PYGLP06737 847 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 AKT1P31749 480 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 ILF2Q12905 390 aaKnown RBP17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 ITIH4Q14624 930 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 IRF4Q15306 451 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 PNCKQ6P2M8 343 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 FRMD1Q8N878 549 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 TP53I13Q8NBR0 393 aaPredicted RBP17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 PLA2G15Q8NCC3 412 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 ACVR1CQ8NER5 493 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 TLCD1Q96CP7 247 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 CCDC97Q96F63 343 aaPredicted RBP17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 GPR174Q9BXC1 333 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 CLPBQ9H078 707 aa17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 C6orf106Q9H6K1 298 aaPredicted RBP17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 CORO1CQ9ULV4 474 aaPredicted RBP17.65■□□□□ 0.42
PTCHD3-202ENST00000622555 PRMT5O14744 637 aaPredicted RBP17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 AXIN1O15169 862 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 SHOX2O60902 331 aaPredicted RBP17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 SLC25A14O95258 325 aaPredicted RBP17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 MAGOHP61326 146 aaKnown RBP17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 DNAJC3Q13217 504 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 USP10Q14694 798 aaKnown RBP17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 LDLRAP1Q5SW96 308 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms