RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 KCNJ11Q14654 390 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 GPAT3Q53EU6 434 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 AGKQ53H12 422 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 PPM1JQ5JR12 505 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 C6orf141Q5SZD1 244 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 TPRG1LQ5T0D9 272 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 REP15Q6BDI9 236 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 DENND5AQ6IQ26 1287 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 XKRXQ6PP77 449 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 C16orf62Q7Z3J2 963 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 XXYLT1Q8NBI6 393 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 TRPV3Q8NET8 790 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 SEMA4DQ92854 862 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 ELMO3Q96BJ8 720 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 SMAD5Q99717 465 aaKnown RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 PDZD7Q9H5P4 517 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 XPNPEP3Q9NQH7 507 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 PRDM8Q9NQV8 689 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 CHRAC1Q9NRG0 131 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 FBXL12Q9NXK8 326 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 CACNA2D2Q9NY47 1150 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 EMC3Q9P0I2 261 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 CPNE7Q9UBL6 633 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 EGFL7Q9UHF1 273 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 TMX2Q9Y320 296 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 CCDC78A2IDD5 438 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 TFECO14948 347 aaPredicted RBP7.87□□□□□ -1.15
VPS11-209ENST00000622309 ANGPT2O15123 496 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 H2AFYO75367 372 aaKnown RBP7.87□□□□□ -1.15
VPS11-209ENST00000622309 PIGNO95427 931 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 IFNA14P01570 189 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 ALDOAP04075 364 aaKnown RBP7.87□□□□□ -1.15
VPS11-209ENST00000622309 CHRNGP07510 517 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 CLEC2LP0C7M8 214 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 HSMCR30P0CW71 290 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 CHRNA5P30532 468 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 GABARAPL2P60520 117 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 RPL7AP62424 266 aaKnown RBP7.87□□□□□ -1.15
VPS11-209ENST00000622309 CYP51A1Q16850 503 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 LEXMQ3ZCV2 418 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 TXNRD3NBQ6F5E7 133 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 NAPRTQ6XQN6 538 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 HDDC2Q7Z4H3 204 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 CCNYL1Q8N7R7 359 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 SLC7A14Q8TBB6 771 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 FATE1Q969F0 183 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 LGALS12Q96DT0 336 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 SECISBP2Q96T21 854 aaKnown RBP7.87□□□□□ -1.15
VPS11-209ENST00000622309 PPA2Q9H2U2 334 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 ZFP14Q9HCL3 533 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 TMLHEQ9NVH6 421 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 INTS10Q9NVR2 710 aaKnown RBP7.87□□□□□ -1.15
VPS11-209ENST00000622309 CD300AQ9UGN4 299 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 PCDHGB7Q9Y5F8 929 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 PNMA8CA0A1B0GUJ8 204 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 SSX4O60224 188 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 TSC22D2O75157 780 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 SOAT2O75908 522 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 OR2B3O76000 313 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 TRAPPC2P0DI81 140 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 TRAPPC2BP0DI82 140 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 TAL1P17542 331 aaPredicted RBP7.87□□□□□ -1.15
VPS11-209ENST00000622309 RAP1GAPP47736 663 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 RENBPP51606 427 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 SNRPD2P62316 118 aaKnown RBP7.87□□□□□ -1.15
VPS11-209ENST00000622309 PDK2Q15119 407 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 BTBD16Q32M84 506 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 BCL7AQ4VC05 210 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 SPANXN2Q5MJ10 180 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 CASC4Q6P4E1 433 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 C16orf86Q6ZW13 317 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 CREB3L2Q70SY1 520 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 PRSS48Q7RTY5 328 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 NLGN4XQ8N0W4 816 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 CPXCR1Q8N123 301 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 PARP16Q8N5Y8 322 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 ZNF555Q8NEP9 628 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 OR8H1Q8NGG4 311 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 SPATA18Q8TC71 538 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 PPP1R13LQ8WUF5 828 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 SLC22A17Q8WUG5 538 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 AKAP1Q92667 903 aaKnown RBP eCLIP7.87□□□□□ -1.15
VPS11-209ENST00000622309 FBXW5Q969U6 566 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 GDF15Q99988 308 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 BBS2Q9BXC9 721 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.87□□□□□ -1.15
VPS11-209ENST00000622309 RSAD1Q9HA92 442 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 ZNF358Q9NW07 568 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 CCDC167Q9P0B6 97 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 NUFIP1Q9UHK0 495 aaKnown RBP7.87□□□□□ -1.15
VPS11-209ENST00000622309 PCDHB3Q9Y5E6 796 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 CNTNAP1P78357 1384 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 MEIOCA2RUB1 952 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 SLC15A5A6NIM6 579 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 STX7O15400 261 aaKnown RBP7.87□□□□□ -1.15
VPS11-209ENST00000622309 CAPN5O15484 640 aaPredicted RBP7.87□□□□□ -1.15
VPS11-209ENST00000622309 CHMP2AO43633 222 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 RGS20O76081 388 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 ITGB3P05106 788 aa7.87□□□□□ -1.15
VPS11-209ENST00000622309 MYCLP12524 364 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms