RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 CDH5P33151 784 aaPredicted RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 GPR1P46091 355 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 PFKPQ01813 784 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 PCLAFQ15004 111 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 TCEAL5Q5H9L2 206 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 PITRM1Q5JRX3 1037 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 HECTD3Q5T447 861 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 CNSTQ6PJW8 725 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 CLIP3Q96DZ5 547 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 OR52B2Q96RD2 323 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 FANCEQ9HB96 536 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 RPS6KA6Q9UK32 745 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 ZMYND8Q9ULU4 1186 aaPredicted RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 SF3B1O75533 1304 aaKnown RBP eCLIP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 PIP5K1BO14986 540 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 MED26O95402 600 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 GOT2P00505 430 aaKnown RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 GNRH1P01148 92 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 CYP4B1P13584 511 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 CHRNA4P43681 627 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 SNRPD1P62314 119 aaKnown RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 PERM1Q5SV97 790 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 GLYATQ6IB77 296 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 FAM151BQ6UXP7 276 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 BTN2A1Q7KYR7 527 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF554Q86TJ5 538 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 GIPC3Q8TF64 312 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 CXorf40BQ96DE9 158 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 SLC39A8Q9C0K1 460 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 GALNT8Q9NY28 637 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 ADGRE2Q9UHX3 823 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 CNTN6Q9UQ52 1028 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 DYTNA2CJ06 578 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 EFCAB10A6NFE3 127 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 YJEFN3A6XGL0 299 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 GUCY1B2O75343 617 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 DLDP09622 509 aaKnown RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 NCK1P16333 377 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 PRKCHP24723 683 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 CLCQ05315 142 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 LIPEQ05469 1076 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 OLIG2Q13516 323 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 PLA2G4EQ3MJ16 856 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 INO80DQ53TQ3 878 aaPredicted RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 RSBN1Q5VWQ0 802 aaPredicted RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 LYPLAL1Q5VWZ2 237 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 CDC73Q6P1J9 531 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 FAM220AQ7Z4H9 259 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 MON1AQ86VX9 555 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 CBR4Q8N4T8 237 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 ARL10Q8N8L6 244 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 ROPN1LQ96C74 230 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 OR52E6Q96RD3 313 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 CCDC106Q9BWC9 280 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 LRRC42Q9Y546 428 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 A0A0G2JLL6 359 aaPredicted RBP8.3□□□□□ -1.08
ALMS1-208ENST00000620466 C1QTNF3-AMACRE9PGA6 284 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 HCRTO43612 131 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 LRATO95237 230 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 AOC1P19801 751 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 PURAQ00577 322 aaKnown RBP8.3□□□□□ -1.08
ALMS1-208ENST00000620466 TMEM198Q66K66 360 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 EPGNQ6UW88 154 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 PRRT2Q7Z6L0 340 aaPredicted RBP8.3□□□□□ -1.08
ALMS1-208ENST00000620466 ADAMTSL2Q86TH1 951 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 TMEM110Q86TL2 294 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 PDSS2Q86YH6 399 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 TEKT5Q96M29 485 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 VPS45Q9NRW7 570 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 ANKRD36CQ5JPF3 1778 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 OR10H2O60403 315 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 ERN1O75460 977 aaKnown RBP8.3□□□□□ -1.08
ALMS1-208ENST00000620466 OR6B1O95007 311 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 PAX3P23760 479 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 HTR7P34969 479 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 PARP15Q460N3 678 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 FRMD7Q6ZUT3 714 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 SAPCD2Q86UD0 394 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.3□□□□□ -1.08
ALMS1-208ENST00000620466 FLCNQ8NFG4 579 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 CRYGNQ8WXF5 182 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 COL26A1Q96A83 441 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 ITCHQ96J02 903 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 TBATAQ96M53 351 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 SLC25A51Q9H1U9 297 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 MUC13Q9H3R2 512 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 MYBPHLA2RUH7 354 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 CCDC85CA6NKD9 419 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 ZBTB11O95625 1053 aaPredicted RBP8.3□□□□□ -1.08
ALMS1-208ENST00000620466 EPORP19235 508 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 TLX1P31314 330 aaPredicted RBP8.3□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF846Q147U1 533 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 ARMC4Q5T2S8 1044 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 TIFABQ6ZNK6 161 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 OR4K2Q8NGD2 314 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF483Q8TF39 744 aaPredicted RBP8.3□□□□□ -1.08
ALMS1-208ENST00000620466 BTN2A3PQ96KV6 586 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 STRA6Q9BX79 667 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 TM6SF2Q9BZW4 377 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 ALG2Q9H553 416 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms