RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TXNDC16Q9P2K2 825 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SLC17A6Q9P2U8 582 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 PSMC3IPQ9P2W1 217 aaPredicted RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 LGALS13Q9UHV8 139 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 TMPRSS11EQ9UL52 423 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 CNOT6Q9ULM6 557 aaKnown RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 TCF20Q9UGU0 1960 aaKnown RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 MIA3Q5JRA6 1907 aa7.96□□□□□ -1.13
CPNE3-209ENST00000620393 IGHV1OR15-9A0A0B4J2B8 117 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 CCDC163A0A0D9SF12 145 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 IQANK1A0A1B0GTG1 560 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 HMX2A2RU54 273 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 PRR23AA6NEV1 266 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 GOLGA6L10A6NI86 522 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 AXIN1O15169 862 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 RGS16O15492 202 aaPredicted RBP7.96□□□□□ -1.14
CPNE3-209ENST00000620393 NDUFS3O75489 264 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 KRT37O76014 449 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 KRT38O76015 456 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 SYF2O95926 243 aaKnown RBP7.96□□□□□ -1.14
CPNE3-209ENST00000620393 PYGLP06737 847 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 ACRV1P26436 265 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 TEAD1P28347 426 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 PTGER3P43115 390 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 GPR1P46091 355 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 CD151P48509 253 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 POLD2P49005 469 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 PXNP49023 591 aaPredicted RBP7.96□□□□□ -1.14
CPNE3-209ENST00000620393 CCR5P51681 352 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 ADARP55265 1226 aaKnown RBP7.96□□□□□ -1.14
CPNE3-209ENST00000620393 ITIH4Q14624 930 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 LRRC14Q15048 493 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 DBN1Q16643 649 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 USP39Q53GS9 565 aaKnown RBP7.96□□□□□ -1.14
CPNE3-209ENST00000620393 ZNF789Q5FWF6 425 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 TMEM31Q5JXX7 168 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 RNF187Q5TA31 235 aaPredicted RBP7.96□□□□□ -1.14
CPNE3-209ENST00000620393 PNCKQ6P2M8 343 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 CNSTQ6PJW8 725 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 TIFABQ6ZNK6 161 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 ZC3HC1Q86WB0 502 aaKnown RBP7.96□□□□□ -1.14
CPNE3-209ENST00000620393 NXPE1Q8N323 547 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 HEXDCQ8WVB3 486 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 RLN3Q8WXF3 142 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 LPGAT1Q92604 370 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 KLK6Q92876 244 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 GLYATL1Q969I3 302 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 ARL8AQ96BM9 186 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 CENPTQ96BT3 561 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 MTBPQ96DY7 904 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 NUS1Q96E22 293 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 PGM2Q96G03 612 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 VPS35Q96QK1 796 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 RBBP8Q99708 897 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 C1QTNF7Q9BXJ2 289 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 FBXO6Q9NRD1 293 aaPredicted RBP7.96□□□□□ -1.14
CPNE3-209ENST00000620393 ZDHHC3Q9NYG2 299 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 TBK1Q9UHD2 729 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 CRLS1Q9UJA2 301 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 CYP8B1Q9UNU6 501 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 MTO1Q9Y2Z2 717 aaKnown RBP7.96□□□□□ -1.14
CPNE3-209ENST00000620393 VWA7Q9Y334 891 aa7.96□□□□□ -1.14
CPNE3-209ENST00000620393 ATG2BQ96BY7 2078 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 IGLV3-16A0A075B6K0 115 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 FADS2P1A8MWK0 482 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 TRIM49D1C9J1S8 452 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 K7ESM1 405 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 PRMT5O14744 637 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 RAD51BO15315 384 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 SLC31A1O15431 190 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 GPR39O43194 453 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 LAMTOR5O43504 91 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 LATO43561 262 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 OR1I1O60431 355 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 SLC25A14O95258 325 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 SOD1P00441 154 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 MT-ND3P03897 115 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 ITGA2BP08514 1039 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 F7P08709 466 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 ZNF7P17097 686 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 RPS3P23396 243 aaKnown RBP eCLIP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 MAT2AP31153 395 aaKnown RBP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 FMO4P31512 558 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 TRIM23P36406 574 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 NUDT1P36639 197 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 NSG1P42857 185 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 LIMK2P53671 638 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 PPP2CBP62714 309 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 PPP2CAP67775 309 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 GPS2Q13227 327 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 INPP5AQ14642 412 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 LDLRAP1Q5SW96 308 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 SWT1Q5T5J6 900 aaKnown RBP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 GPRC6AQ5T6X5 926 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 MROH9Q5TGP6 573 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 AGBL2Q5U5Z8 902 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 KIAA0895LQ68EN5 471 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 ZNF549Q6P9A3 640 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 ADAMTSL4Q6UY14 1074 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 TAOK1Q7L7X3 1001 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms