RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ZADH2Q8N4Q0 377 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 C3orf20Q8ND61 904 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 ANKRD20A12PQ8NF67 263 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 DNAJB8Q8NHS0 232 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 EPS8L1Q8TE68 723 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 TEKT4Q8WW24 435 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 USP9XQ93008 2570 aaPredicted RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 SCRN2Q96FV2 425 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 SGSM3Q96HU1 749 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 TIGD1Q96MW7 591 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 MGME1Q9BQP7 344 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 KLC2Q9H0B6 622 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 MCCC2Q9HCC0 563 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 KCND1Q9NSA2 647 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 SNX10Q9Y5X0 201 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 UTP20O75691 2785 aaKnown RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 TLCD2A6NGC4 264 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 ARGFXA6NJG6 315 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 C2CD4BA6NLJ0 364 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 CHUKO15111 745 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 LETM1O95202 739 aaPredicted RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 ZSCAN22P10073 491 aaPredicted RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 TFE3P19532 575 aaPredicted RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 PRCPP42785 496 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 SYKP43405 635 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 PRSS12P56730 875 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 CEBPZQ03701 1054 aaKnown RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 SSPNQ14714 243 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 PCOLCEQ15113 449 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 SMTNL2Q2TAL5 461 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 CFAP58Q5T655 872 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 TCERG1LQ5VWI1 586 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 TTI2Q6NXR4 508 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 FAM173BQ6P4H8 233 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 KLHL35Q6PF15 583 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 TRIM72Q6ZMU5 477 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 USP45Q70EL2 814 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 CUZD1Q86UP6 607 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 DRC7Q8IY82 874 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 UNC5BQ8IZJ1 945 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 OR6K2Q8NGY2 324 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 SPATA3Q8NHX4 192 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 PROKR1Q8TCW9 393 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 PDCD6IPQ8WUM4 868 aaKnown RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 C18orf8Q96DM3 657 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 ENKD1Q9H0I2 346 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 NDFIP2Q9NV92 336 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 B4GALT6Q9UBX8 382 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 CNOT8Q9UFF9 292 aaKnown RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 TCFL5Q9UL49 500 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 FZD10Q9ULW2 581 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 ACTL7AQ9Y615 435 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 DNMT3AQ9Y6K1 912 aaPredicted RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 DOPEY1Q5JWR5 2465 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 LRRTM2O43300 516 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 DNAJB5O75953 348 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 FGFR1OPO95684 399 aaKnown RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 KRT5P13647 590 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 ITIH2P19823 946 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 AK4P27144 223 aaPredicted RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 ME1P48163 572 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 BIRC2Q13490 618 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 STIM1Q13586 685 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 ACOX1Q15067 660 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 PLCL1Q15111 1095 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 TRIM65Q6PJ69 517 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 SLC30A9Q6PML9 568 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 NDUFAF2Q8N183 169 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 NXPE1Q8N323 547 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 CHDHQ8NE62 594 aaPredicted RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 CPT1BQ92523 772 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 NCSTNQ92542 709 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 ZNF501Q96CX3 271 aaPredicted RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 LMF1Q96S06 567 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 RNF32Q9H0A6 362 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 ILKAPQ9H0C8 392 aaPredicted RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 ABCG8Q9H221 673 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 ABI3Q9P2A4 366 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 CNOT6Q9ULM6 557 aaKnown RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 SLC30A1Q9Y6M5 507 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 AHCTF1Q8WYP5 2266 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 PSMA7O14818 248 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 NUAK1O60285 661 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 PGLSO95336 258 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 CYP1A1P04798 512 aaPredicted RBP4.5□□□□□ -1.69
SNCA-213ENST00000618500 PYGMP11217 842 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 IGFBP2P18065 325 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 FDXRP22570 491 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 CA7P43166 264 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 TUBB3Q13509 450 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 CCDC14Q49A88 953 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 PLEKHS1Q5SXH7 462 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 HENMT1Q5T8I9 393 aaKnown RBP4.5□□□□□ -1.69
SNCA-213ENST00000618500 DPY19L2P1Q6NXN4 242 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 PPP1R2P3Q6NXS1 205 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 HSD11B1LQ7Z5J1 315 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 MRGPREQ86SM8 312 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 ZNF354CQ86Y25 554 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 LRRC49Q8IUZ0 686 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 PELI3Q8N2H9 469 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms