RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 RAPGEFL1Q9UHV5 662 aa22.48■■□□□ 1.19
CBWD3-213ENST00000618217 OAS3Q9Y6K5 1087 aaKnown RBP22.48■■□□□ 1.19
CBWD3-213ENST00000618217 SPTY2D1-AS1A0A0U1RR47 76 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 A0A1B0GVT2 93 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 FAM153BP0C7A2 387 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 PAMP19021 973 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 NXPH1P58417 271 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 VSNL1P62760 191 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 FRG1Q14331 258 aaKnown RBP22.47■■□□□ 1.19
CBWD3-213ENST00000618217 TEAD4Q15561 434 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 FAM153CQ494X1 144 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 KHDC1Q4VXA5 237 aaKnown RBP22.47■■□□□ 1.19
CBWD3-213ENST00000618217 ZRANB3Q5FWF4 1079 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 WDR93Q6P2C0 686 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 TRIM74Q86UV6 250 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 NXPE1Q8N323 547 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 C9orf72Q96LT7 481 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 IL1RAPL1Q9NZN1 696 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 ANKRD6Q9Y2G4 727 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 LRP4O75096 1905 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 ADAMTS9Q9P2N4 1935 aa22.47■■□□□ 1.19
CBWD3-213ENST00000618217 TMEM202A6NGA9 273 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 CACNB4O00305 520 aaPredicted RBP22.46■■□□□ 1.19
CBWD3-213ENST00000618217 SLC25A14O95258 325 aaPredicted RBP22.46■■□□□ 1.19
CBWD3-213ENST00000618217 GPX6P59796 221 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 NHLH1Q02575 133 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 PDE1CQ14123 709 aaPredicted RBP22.46■■□□□ 1.19
CBWD3-213ENST00000618217 FZD2Q14332 565 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 SEMA3AQ14563 771 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 LONRF1Q17RB8 773 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 CEP128Q6ZU80 1094 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 GPR161Q8N6U8 529 aaKnown RBP22.46■■□□□ 1.19
CBWD3-213ENST00000618217 PNPLA1Q8N8W4 532 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 DDHD1Q8NEL9 900 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 GPR150Q8NGU9 434 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.46■■□□□ 1.19
CBWD3-213ENST00000618217 PNMA8BQ9ULN7 279 aaPredicted RBP22.46■■□□□ 1.19
CBWD3-213ENST00000618217 TMEM131Q92545 1883 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 GOLGA8KD6RF30 607 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 GOLGA8TH3BQL2 631 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 CD3EAPO15446 510 aaKnown RBP22.46■■□□□ 1.19
CBWD3-213ENST00000618217 CTSKP43235 329 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 THOP1P52888 689 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 CCDC6Q16204 474 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 GPRC6AQ5T6X5 926 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 KCTD16Q68DU8 428 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 NEPROQ6NW34 567 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 TRMT10BQ6PF06 316 aaKnown RBP22.46■■□□□ 1.19
CBWD3-213ENST00000618217 MACC1Q6ZN28 852 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 PHYKPLQ8IUZ5 450 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 GSPT2Q8IYD1 628 aaKnown RBP22.46■■□□□ 1.19
CBWD3-213ENST00000618217 ULK4Q96C45 1275 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 PHOX2BQ99453 314 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 LRRC4CQ9HCJ2 640 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 TRIM39Q9HCM9 518 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 ARFGAP3Q9NP61 516 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 CATSPERZQ9NTU4 200 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 MOCS1Q9NZB8 636 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 SLC6A14Q9UN76 642 aa22.46■■□□□ 1.19
CBWD3-213ENST00000618217 IGLV3-16A0A075B6K0 115 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 CTIFO43310 598 aaKnown RBP22.45■■□□□ 1.18
CBWD3-213ENST00000618217 MAGEC1O60732 1142 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 FUCA1P04066 466 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 CEACAM5P06731 702 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 ACRV1P26436 265 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 SSTR1P30872 391 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 KIF19Q2TAC6 998 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 TRIM61Q5EBN2 209 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 ZNF648Q5T619 568 aaPredicted RBP22.45■■□□□ 1.18
CBWD3-213ENST00000618217 ADGRG6Q86SQ4 1221 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 SERPINA9Q86WD7 417 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 PALM2Q8IXS6 379 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 SKA1Q96BD8 255 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 CCDC97Q96F63 343 aaPredicted RBP22.45■■□□□ 1.18
CBWD3-213ENST00000618217 WDR92Q96MX6 357 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 PARD6BQ9BYG5 372 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 TXLNGYQ9BZA5 131 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 SMOC1Q9H4F8 434 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 C20orf96Q9NUD7 363 aaPredicted RBP22.45■■□□□ 1.18
CBWD3-213ENST00000618217 CRLS1Q9UJA2 301 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 SLC17A4Q9Y2C5 497 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 TMEM98Q9Y2Y6 226 aa22.45■■□□□ 1.18
CBWD3-213ENST00000618217 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.45■■□□□ 1.18
CBWD3-213ENST00000618217 TNFRSF10CO14798 259 aa22.44■■□□□ 1.18
CBWD3-213ENST00000618217 CFIP05156 583 aa22.44■■□□□ 1.18
CBWD3-213ENST00000618217 C21orf59P57076 290 aa22.44■■□□□ 1.18
CBWD3-213ENST00000618217 EIF2B5Q13144 721 aaKnown RBP22.44■■□□□ 1.18
CBWD3-213ENST00000618217 PTK2BQ14289 1009 aa22.44■■□□□ 1.18
CBWD3-213ENST00000618217 SMAD1Q15797 465 aaKnown RBP22.44■■□□□ 1.18
CBWD3-213ENST00000618217 DBN1Q16643 649 aa22.44■■□□□ 1.18
CBWD3-213ENST00000618217 FASTKD1Q53R41 847 aaKnown RBP22.44■■□□□ 1.18
CBWD3-213ENST00000618217 LDLRAP1Q5SW96 308 aa22.44■■□□□ 1.18
CBWD3-213ENST00000618217 CYS1Q717R9 158 aa22.44■■□□□ 1.18
CBWD3-213ENST00000618217 TAS2R42Q7RTR8 314 aa22.44■■□□□ 1.18
CBWD3-213ENST00000618217 GSDMBQ8TAX9 411 aa22.44■■□□□ 1.18
CBWD3-213ENST00000618217 CERS2Q96G23 380 aa22.44■■□□□ 1.18
CBWD3-213ENST00000618217 SCARF2Q96GP6 870 aaPredicted RBP22.44■■□□□ 1.18
CBWD3-213ENST00000618217 FGF22Q9HCT0 170 aa22.44■■□□□ 1.18
CBWD3-213ENST00000618217 VPS18Q9P253 973 aa22.44■■□□□ 1.18
CBWD3-213ENST00000618217 ATXN10Q9UBB4 475 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms