RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PCDHGA8Q9Y5G5 932 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 TSPAN11A1L157 253 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 IGLON5A6NGN9 336 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 AP3B1O00203 1094 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 TCEA3O75764 348 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 PDHA1P08559 390 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 CYP2A6P11509 494 aaPredicted RBP14.8□□□□□ -0.04
UBXN1-218ENST00000616865 TIMP2P16035 220 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 CTPS1P17812 591 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 RPL21P46778 160 aaKnown RBP14.8□□□□□ -0.04
UBXN1-218ENST00000616865 ELP6Q0PNE2 266 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 LY6DQ14210 128 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 IHHQ14623 411 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 KCNJ11Q14654 390 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 SLC1A5Q15758 541 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 UGP2Q16851 508 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 LRRC73Q5JTD7 316 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 SIRPB2Q5JXA9 342 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 PERM1Q5SV97 790 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 ASB12Q8WXK4 309 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 CPT1BQ92523 772 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 CCDC97Q96F63 343 aaPredicted RBP14.8□□□□□ -0.04
UBXN1-218ENST00000616865 PRR11Q96HE9 360 aaPredicted RBP14.8□□□□□ -0.04
UBXN1-218ENST00000616865 SLC46A1Q96NT5 459 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 BOCQ9BWV1 1114 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 SPASTQ9UBP0 616 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 APOBEC3BQ9UH17 382 aaKnown RBP14.8□□□□□ -0.04
UBXN1-218ENST00000616865 ITM2BQ9Y287 266 aa14.8□□□□□ -0.04
UBXN1-218ENST00000616865 LOC285095A0A1B0GVY8 99 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 PMS2P1A4D2B8 440 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 COL6A6A6NMZ7 2263 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 CDRT15L2A8MXV6 281 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 ANKRD66B4E2M5 251 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 GOLGA8MH3BSY2 632 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 SMAPO00193 183 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 FZD6O60353 706 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 SUN1O94901 812 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 PRKCGP05129 697 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 ITIH2P19823 946 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 ADRA1AP35348 466 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 CHRNA4P43681 627 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 PDX1P52945 283 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 ITGA8P53708 1063 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 CDH17Q12864 832 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 OLIG2Q13516 323 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 ARHGEF7Q14155 803 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 PTK2BQ14289 1009 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 MORF4L2Q15014 288 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 QPCTQ16769 361 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 C6orf132Q5T0Z8 1188 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 DUPD1Q68J44 220 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 KCTD11Q693B1 232 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 HOOK3Q86VS8 718 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 KLHDC8BQ8IXV7 354 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 SLC35F3Q8IY50 421 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 PHACTR4Q8IZ21 702 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 LRRN4CLQ8ND94 238 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 OR52K1Q8NGK4 314 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 PIH1D2Q8WWB5 315 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 NAT6Q93015 286 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 VOPP1Q96AW1 172 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 TBATAQ96M53 351 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 TRIB3Q96RU7 358 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 SRPK1Q96SB4 655 aaKnown RBP14.79□□□□□ -0.04
UBXN1-218ENST00000616865 LRRC61Q9BV99 259 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 TCEAL2Q9H3H9 227 aaPredicted RBP14.79□□□□□ -0.04
UBXN1-218ENST00000616865 EPB41L5Q9HCM4 733 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 PCDH12Q9NPG4 1184 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 FAM114A2Q9NRY5 505 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 WHRNQ9P202 907 aa14.79□□□□□ -0.04
UBXN1-218ENST00000616865 FLNBO75369 2602 aaKnown RBP14.79□□□□□ -0.04
UBXN1-218ENST00000616865 LRP4O75096 1905 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 A8MX80 341 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 K7ENP7 123 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 SEC31AO94979 1220 aaKnown RBP14.78□□□□□ -0.04
UBXN1-218ENST00000616865 PRLP01236 227 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 C6P13671 934 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 VIPR1P32241 457 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 IGFALSP35858 605 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 MLLT3P42568 568 aaPredicted RBP14.78□□□□□ -0.04
UBXN1-218ENST00000616865 MAGEA6P43360 314 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 RPIAP49247 311 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 THOP1P52888 689 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 CAV1Q03135 178 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 SEPT6Q14141 434 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 PRRT3Q5FWE3 981 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 RNASEH2BQ5TBB1 312 aaKnown RBP14.78□□□□□ -0.04
UBXN1-218ENST00000616865 ANKRD22Q5VYY1 191 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 INO80CQ6PI98 192 aaPredicted RBP14.78□□□□□ -0.04
UBXN1-218ENST00000616865 RANBP10Q6VN20 620 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 CLEC14AQ86T13 490 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 ZSWIM9Q86XI8 627 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 IFT20Q8IY31 132 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 ARL14Q8N4G2 192 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 WDR36Q8NI36 951 aaKnown RBP14.78□□□□□ -0.04
UBXN1-218ENST00000616865 WDR48Q8TAF3 677 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 BLOC1S5Q8TDH9 187 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 CXorf40AQ8TE69 158 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 IFT81Q8WYA0 676 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 UBXN4Q92575 508 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms