RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FAM72DQ6L9T8 149 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 STRADAQ7RTN6 431 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 FAM72BQ86X60 149 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 CCDC13Q8IYE1 715 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 BMPERQ8N8U9 685 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 KCTD6Q8NC69 237 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 CENPIQ92674 756 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 MAGOHBQ96A72 148 aaKnown RBP17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 RTP4Q96DX8 246 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 PHF12Q96QT6 1004 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 AP1M1Q9BXS5 423 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 OSBPL8Q9BZF1 889 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 ACBD3Q9H3P7 528 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 CYP4F12Q9HCS2 524 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 NDFIP2Q9NV92 336 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 RAB21Q9UL25 225 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 KCTD3Q9Y597 815 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 LRRD1A4D1F6 860 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 CACNB4O00305 520 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 NDC80O14777 642 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 ZW10O43264 779 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 LRCH4O75427 683 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 FGF1P05230 155 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 ADRA1BP35368 520 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 ETFBP38117 255 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 LIG3P49916 1009 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 KIAA1024LP59773 190 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 TFDP3Q5H9I0 405 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 SCYL2Q6P3W7 929 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 SYDE1Q6ZW31 735 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 MAMDC2Q7Z304 686 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 KDELC2Q7Z4H8 507 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 PYROXD2Q8N2H3 581 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 NETO2Q8NC67 525 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 CPT1CQ8TCG5 803 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 ZDHHC1Q8WTX9 485 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 TEKT4Q8WW24 435 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 HMCESQ96FZ2 354 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 GDAP1L1Q96MZ0 367 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 CTRCQ99895 268 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 LRRC1Q9BTT6 524 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 ZWILCHQ9H900 591 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 MOSPD1Q9UJG1 213 aa17.52■□□□□ 0.4
TRAPPC3-209ENST00000616395 DOPEY1Q5JWR5 2465 aa17.52■□□□□ 0.39
TRAPPC3-209ENST00000616395 TNFRSF10CO14798 259 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 ATP8B1O43520 1251 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 ECEL1O95672 775 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 GAS8O95995 478 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 GPR3P46089 330 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 MARCKSL1P49006 195 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 SUOXP51687 545 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 AIF1P55008 147 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 TAS2R40P59535 323 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 DR1Q01658 176 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 RAD51Q06609 339 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 ABHD18Q0P651 414 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 CUL1Q13616 776 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 TFDP2Q14188 446 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 KRT81Q14533 505 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 NAA30Q147X3 362 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 AGERQ15109 404 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 CRTC2Q53ET0 693 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 VSIG1Q86XK7 387 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 EIF1ADQ8N9N8 165 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 TEFMQ96QE5 360 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 ANKZF1Q9H8Y5 726 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 PCDH12Q9NPG4 1184 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 GPATCH2LQ9NWQ4 482 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 SMARCAL1Q9NZC9 954 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 PPARGC1AQ9UBK2 798 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 HPCAL4Q9UM19 191 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 NEU3Q9UQ49 428 aa17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 MRPS18BQ9Y676 258 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-209ENST00000616395 TMCC1O94876 653 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 HEXIM1O94992 359 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 CLDN1O95832 211 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 DDAH2O95865 285 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 CCNB1P14635 433 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 H2AFXP16104 143 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 KELP23276 732 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 ELAVL4P26378 380 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 MIPP30301 263 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 BIRC2Q13490 618 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 MANEALQ5VSG8 457 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 SPOCD1Q6ZMY3 1216 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 NRROSQ86YC3 692 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 PSTKQ8IV42 348 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 SRRM1Q8IYB3 904 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 CCHCR1Q8TD31 782 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 PATE1Q8WXA2 126 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 RNF25Q96BH1 459 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 LGR4Q9BXB1 951 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 SUDS3Q9H7L9 328 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 CASS4Q9NQ75 786 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 FAM114A2Q9NRY5 505 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 OR12D3Q9UGF7 316 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 MFHAS1Q9Y4C4 1052 aa17.5■□□□□ 0.39
TRAPPC3-209ENST00000616395 IGHV1OR21-1A0A087WYE8 117 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 INSIG1O15503 277 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms