RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 S100PP25815 95 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 CDKN2CP42773 168 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 ANTXR2P58335 489 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 METTL3Q86U44 580 aaKnown RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 SMARCD1Q96GM5 515 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 AGPSO00116 658 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 QSOX1O00391 747 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 IFNA10P01566 189 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 IFNA4P05014 189 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 CSN2P05814 226 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 ANXA8P13928 327 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 EPB42P16452 691 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 FGL2Q14314 439 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 COLEC12Q5KU26 742 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 ATF7IP2Q5U623 682 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 SERPINA13PQ6UXR4 307 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 NKD2Q969F2 451 aaPredicted RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 MAELQ96JY0 434 aaKnown RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 CORO1BQ9BR76 489 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 RNF6Q9Y252 685 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 SYNDIG1LA6NDD5 238 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 PRKYO43930 277 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 PROSER3Q2NL68 480 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 NOTUMQ6P988 496 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 SH3RF1Q7Z6J0 888 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 SCN4BQ8IWT1 228 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 OR4C6Q8NH72 309 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 MUC3BQ9H195 1237 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 CCDC86Q9H6F5 360 aaKnown RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 PCDHGB7Q9Y5F8 929 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 POLRMTO00411 1230 aaKnown RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 RFPL1O75677 317 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 ODC1P11926 461 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 HTR7P34969 479 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 RGS7P49802 495 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 SLC13A2Q13183 592 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 GIT2Q14161 759 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 GK3PQ14409 553 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 PTGR1Q14914 329 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 CYP1B1Q16678 543 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 CUZD1Q86UP6 607 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 PHF13Q86YI8 300 aaPredicted RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 DYNLL2Q96FJ2 89 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 COL21A1Q96P44 957 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 RIOK2Q9BVS4 552 aaKnown RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 MYNNQ9NPC7 610 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 TMEM184CQ9NVA4 438 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 PDP1Q9P0J1 537 aaPredicted RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 HIST1H2ABP04908 130 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 CYP3A4P08684 503 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 HGFP14210 728 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 MLLT6P55198 1093 aaPredicted RBP8.72□□□□□ -1.01
TTC28-208ENST00000612946 MAMLD1Q13495 774 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 USP30Q70CQ3 517 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 HIST3H2AQ7L7L0 130 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 SVBPQ8N300 66 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 HIST1H2ACQ93077 130 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 PPP1R14AQ96A00 147 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 RUSC1Q9BVN2 902 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 RAVER2Q9HCJ3 691 aaKnown RBP8.72□□□□□ -1.01
TTC28-208ENST00000612946 ZFP57Q9NU63 452 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 ZNF214Q9UL59 606 aaPredicted RBP8.72□□□□□ -1.01
TTC28-208ENST00000612946 RPL6Q02878 288 aaKnown RBP8.72□□□□□ -1.01
TTC28-208ENST00000612946 GRB10Q13322 594 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 ARMC6Q6NXE6 501 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 KLHL35Q6PF15 583 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 ZNF720Q7Z2F6 126 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 ERMP1Q7Z2K6 904 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 GIMAP5Q96F15 307 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 C3orf14Q9HBI5 128 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 SLC7A8Q9UHI5 535 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 STAU1O95793 577 aaKnown RBP8.72□□□□□ -1.01
TTC28-208ENST00000612946 KDELR1P24390 212 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 PNLIPRP1P54315 467 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 CDH13P55290 713 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 CYP2A13Q16696 494 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 PFKFB4Q16877 469 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 PHF21BQ96EK2 531 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 BTF3L4Q96K17 158 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 TREM1Q9NP99 234 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 KCNN3Q9UGI6 736 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 PNMA8BQ9ULN7 279 aaPredicted RBP8.72□□□□□ -1.01
TTC28-208ENST00000612946 SPATA31A6Q5VVP1 1343 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 OR2B3O76000 313 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 TOB1P50616 345 aaPredicted RBP8.72□□□□□ -1.01
TTC28-208ENST00000612946 CD83Q01151 205 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 SLC22A10Q63ZE4 541 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 ANKS1BQ7Z6G8 1248 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 SYT12Q8IV01 421 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 NACC2Q96BF6 587 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 CNDP2Q96KP4 475 aaKnown RBP8.72□□□□□ -1.01
TTC28-208ENST00000612946 SYT15Q9BQS2 421 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 SPATA9Q9BWV2 254 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 ADAM10O14672 748 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 MGAT1P26572 445 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 EIF2DP41214 584 aaKnown RBP8.72□□□□□ -1.01
TTC28-208ENST00000612946 TAS2R43P59537 309 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 BEND5Q7L4P6 421 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 SLC35C1Q96A29 364 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 CMAHPQ9Y471 501 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms