RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SNNO75324 88 aaPredicted RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 KAT7O95251 611 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 WISP3O95389 354 aaPredicted RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 TGDSO95455 350 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 PRAMEF1O95521 474 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 ESR1P03372 595 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 PRNPP04156 253 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 SERPINE1P05121 402 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 PYGLP06737 847 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 CTSLP07711 333 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 CCDC166P0CW27 439 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 TROVE2P10155 538 aaKnown RBP eCLIP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 MYL2P10916 166 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 RALBP11234 206 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 FGF3P11487 239 aaPredicted RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 PKMP14618 531 aaKnown RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 ZNF30P17039 623 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 CD9P21926 228 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 LHCGRP22888 699 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 GRK2P25098 689 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 FMO4P31512 558 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 GRIA2P42262 883 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 TIAL1Q01085 375 aaKnown RBP eCLIP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 BST1Q10588 318 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 DLG1Q12959 904 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 NFATC2Q13469 925 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 ARHGEF7Q14155 803 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 CSHL1Q14406 222 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 GRIN2CQ14957 1233 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 GPR33Q49SQ1 333 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 C9orf64Q5T6V5 341 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 LRRC8EQ6NSJ5 796 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 C6orf89Q6UWU4 347 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 FAM151BQ6UXP7 276 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 TTC7BQ86TV6 843 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 C10orf107Q8IVU9 208 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 ZNF366Q8N895 744 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 TMIEQ8NEW7 156 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 ZNF398Q8TD17 642 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 HEXDCQ8WVB3 486 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 PBXIP1Q96AQ6 731 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 C7orf26Q96N11 449 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 BIRC8Q96P09 236 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 RPP25Q9BUL9 199 aaKnown RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 MRPL46Q9H2W6 279 aaKnown RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 TTYH1Q9H313 450 aaPredicted RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 TMEM245Q9H330 911 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 MTG2Q9H4K7 406 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 ASB8Q9H765 288 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 SYTL2Q9HCH5 934 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 IGSF5Q9NSI5 407 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 TAS2R13Q9NYV9 303 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 KLHL14Q9P2G3 628 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 B4GALT6Q9UBX8 382 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 ARL2BPQ9Y2Y0 163 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 C5orf42Q9H799 3197 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 KIAA1549LQ6ZVL6 1849 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 TRIOBPQ9H2D6 2365 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 TRBV5-4A0A0C4DH59 114 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 A0A1W2PPC1 479 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 C16orf96A6NNT2 1141 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 AGAP14A8MT82 685 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 TARM1B6A8C7 271 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 ARNTLO00327 626 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 PRMT5O14744 637 aaPredicted RBP8.85□□□□□ -0.99
CCDC47-207ENST00000612558 OR1I1O60431 355 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 TRIM13O60858 407 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 H2AFYO75367 372 aaKnown RBP8.85□□□□□ -0.99
CCDC47-207ENST00000612558 VPS26AO75436 327 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 RHOBTB1O94844 696 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 APODP05090 189 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 RBP1P09455 135 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 SBK3P0C264 359 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 ZNF7P17097 686 aaPredicted RBP8.85□□□□□ -0.99
CCDC47-207ENST00000612558 XPAP23025 273 aaPredicted RBP8.85□□□□□ -0.99
CCDC47-207ENST00000612558 VIPR1P32241 457 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 SKIV2L2P42285 1042 aaKnown RBP8.85□□□□□ -0.99
CCDC47-207ENST00000612558 GLRBP48167 497 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 PRKAA2P54646 552 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 HNRNPH2P55795 449 aaKnown RBP8.85□□□□□ -0.99
CCDC47-207ENST00000612558 OCRLQ01968 901 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 SF3A3Q12874 501 aaKnown RBP eCLIP8.85□□□□□ -0.99
CCDC47-207ENST00000612558 ADGRE1Q14246 886 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 ELAVL3Q14576 367 aaKnown RBP8.85□□□□□ -0.99
CCDC47-207ENST00000612558 ZNF234Q14588 700 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 ACAP2Q15057 778 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 E2F5Q15329 346 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 NAIF1Q69YI7 327 aaPredicted RBP8.85□□□□□ -0.99
CCDC47-207ENST00000612558 TMEM207Q6UWW9 146 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 SERPINA13PQ6UXR4 307 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 ZYG11AQ6WRX3 759 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 SERPINA9Q86WD7 417 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 SPATA6LQ8N4H0 392 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 GPR26Q8NDV2 337 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 OR6Y1Q8NGX8 325 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 ANKRD49Q8WVL7 239 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 OR8D1Q8WZ84 308 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 SUSD6Q92537 303 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 PLEKHG4BQ96PX9 1271 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 TRIM55Q9BYV6 548 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms