RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 BTN3A1O00481 513 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 SNX2O60749 519 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 PDE5AO76074 875 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 GLUD1P00367 558 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 SNRPB2P08579 225 aaKnown RBP11.86□□□□□ -0.51
USP6NL-206ENST00000609853 EEF1DP29692 281 aaKnown RBP11.86□□□□□ -0.51
USP6NL-206ENST00000609853 CDKN1CP49918 316 aaPredicted RBP11.86□□□□□ -0.51
USP6NL-206ENST00000609853 EPHA5P54756 1037 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 GRIK2Q13002 908 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 CCNIQ14094 377 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 TSNQ15631 228 aaKnown RBP11.86□□□□□ -0.51
USP6NL-206ENST00000609853 PIGGQ5H8A4 983 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 PPM1LQ5SGD2 360 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 GRAMD4Q6IC98 578 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 ZFP1Q6P2D0 407 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 FBXO46Q6PJ61 603 aaPredicted RBP11.86□□□□□ -0.51
USP6NL-206ENST00000609853 NECAB2Q7Z6G3 386 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 ADAMTSL2Q86TH1 951 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 KBTBD6Q86V97 674 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 GPSM1Q86YR5 675 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 HPS6Q86YV9 775 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 CAMK1DQ8IU85 385 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 HS6ST3Q8IZP7 471 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 OR2AP1Q8NGE2 309 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 SLC26A7Q8TE54 656 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 NRG4Q8WWG1 115 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 CDRT15Q96T59 188 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 CPEB1Q9BZB8 566 aaKnown RBP11.86□□□□□ -0.51
USP6NL-206ENST00000609853 CEP44Q9C0F1 390 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 TNFRSF12AQ9NP84 129 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 NUDT4Q9NZJ9 180 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 EVLQ9UI08 416 aaPredicted RBP11.86□□□□□ -0.51
USP6NL-206ENST00000609853 ZMYM5Q9UJ78 669 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 GNPTGQ9UJJ9 305 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 SARDHQ9UL12 918 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 HS3ST2Q9Y278 367 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 LRCH1Q9Y2L9 728 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 FIS1Q9Y3D6 152 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 TNPO3Q9Y5L0 923 aaKnown RBP11.86□□□□□ -0.51
USP6NL-206ENST00000609853 DNAJC15Q9Y5T4 150 aa11.86□□□□□ -0.51
USP6NL-206ENST00000609853 SCN8AQ9UQD0 1980 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 TRBV5-4A0A0C4DH59 114 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 A0A1W2PRU2 124 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 BBIP1A8MTZ0 92 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 K7ERQ8 282 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 GIPC1O14908 333 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 SMAD6O43541 496 aaKnown RBP11.85□□□□□ -0.51
USP6NL-206ENST00000609853 OR1I1O60431 355 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 NIPSNAP2O75323 286 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 SIX3O95343 332 aaPredicted RBP11.85□□□□□ -0.51
USP6NL-206ENST00000609853 CHEK2O96017 543 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 LINC00271P0C7V0 271 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 ACRP10323 421 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 ME2P23368 584 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 MRPL19P49406 292 aaKnown RBP11.85□□□□□ -0.51
USP6NL-206ENST00000609853 RGS4P49798 205 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 CLCN7P51798 805 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 CDH13P55290 713 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 DMC1Q14565 340 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 GEN1Q17RS7 908 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 COL13A1Q5TAT6 717 aaPredicted RBP11.85□□□□□ -0.51
USP6NL-206ENST00000609853 ZDHHC20Q5W0Z9 365 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 CLEC6AQ6EIG7 209 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 TMEM126BQ8IUX1 230 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 KLHL23Q8NBE8 558 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 SIDT2Q8NBJ9 832 aaKnown RBP11.85□□□□□ -0.51
USP6NL-206ENST00000609853 LEMD2Q8NC56 503 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 OR56A4Q8NGH8 313 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 ZNF483Q8TF39 744 aaPredicted RBP11.85□□□□□ -0.51
USP6NL-206ENST00000609853 TWIST2Q8WVJ9 160 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 DLG3Q92796 817 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 N4BP2L2Q92802 583 aaPredicted RBP11.85□□□□□ -0.51
USP6NL-206ENST00000609853 CCDC124Q96CT7 223 aaKnown RBP11.85□□□□□ -0.51
USP6NL-206ENST00000609853 LINGO1Q96FE5 620 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 LMLNQ96KR4 655 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 SMIM14Q96QK8 99 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 ZNF184Q99676 751 aaPredicted RBP11.85□□□□□ -0.51
USP6NL-206ENST00000609853 SLC46A2Q9BY10 475 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 TM6SF2Q9BZW4 377 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 TMEM45AQ9NWC5 275 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 PPIL1Q9Y3C6 166 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 MTF2Q9Y483 593 aaPredicted RBP11.85□□□□□ -0.51
USP6NL-206ENST00000609853 WASF2Q9Y6W5 498 aa11.85□□□□□ -0.51
USP6NL-206ENST00000609853 C1orf232A0A0U1RR37 186 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 NPEPPSL1A6NEC2 478 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 CDC7O00311 574 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 SCAMP3O14828 347 aaKnown RBP11.84□□□□□ -0.51
USP6NL-206ENST00000609853 GRM6O15303 877 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 CRCPO75575 148 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 PRAMEF1O95521 474 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 ESRRBO95718 433 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 UROSP10746 265 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 CTPS1P17812 591 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 CD70P32970 193 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 PKNOX1P55347 436 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 PPIGQ13427 754 aaKnown RBP eCLIP11.84□□□□□ -0.51
USP6NL-206ENST00000609853 NFATC2Q13469 925 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 CDKN3Q16667 212 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 GSTA3Q16772 222 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms