RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 ZNF517Q6ZMY9 492 aaPredicted RBP3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 HIST3H2AQ7L7L0 130 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 C16orf82Q7Z2V1 217 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 CEP97Q8IW35 865 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 HACE1Q8IYU2 909 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 C1orf87Q8N0U7 546 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 SCML4Q8N228 414 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 IL17RCQ8NAC3 791 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 OR1J2Q8NGS2 313 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 LILRB1Q8NHL6 650 aaPredicted RBP3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 SLC20A1Q8WUM9 679 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 NUDCD2Q8WVJ2 157 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 NEUROD6Q96NK8 337 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 MTERF1Q99551 399 aaKnown RBP3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 NCAPGQ9BPX3 1015 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 MXD3Q9BW11 206 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 PDE7BQ9NP56 450 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 UBA2Q9UBT2 640 aaPredicted RBP3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 PADI1Q9ULC6 663 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 LOXL2Q9Y4K0 774 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 C4orf47A7E2U8 309 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 ANKRD28O15084 1053 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 ADAMDEC1O15204 470 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 KCNN4O15554 427 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 WISP2O76076 250 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 BEST1O76090 585 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 PAPSS2O95340 614 aaPredicted RBP3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 HLA-DOBP13765 273 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 MYOD1P15172 320 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 RRM1P23921 792 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 HRH2P25021 359 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 CCKARP32238 428 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 MSH2P43246 934 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 MFAP4P55083 255 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 STK4Q13043 487 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 KEAP1Q14145 624 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 HLFQ16534 295 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 CALCRLQ16602 461 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 MYLK3Q32MK0 819 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 KRTCAP3Q53RY4 240 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 PDXDC1Q6P996 788 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 PAPD4Q6PIY7 484 aaKnown RBP3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 GFRALQ6UXV0 394 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 MEPCEQ7L2J0 689 aaKnown RBP3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 ENOSF1Q7L5Y1 443 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 BHLHA9Q7RTU4 235 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 TMEM219Q86XT9 240 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 LINC00346Q8IVM7 164 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 ODF3L1Q8IXM7 274 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 SCYL3Q8IZE3 742 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 ZNF441Q8N8Z8 693 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 SLC38A9Q8NBW4 561 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 LMO3Q8TAP4 145 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 SLC44A1Q8WWI5 657 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 SLC22A18Q96BI1 424 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 CALML4Q96GE6 196 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 MED30Q96HR3 178 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 SMC6Q96SB8 1091 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 CSTL1Q9H114 145 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 PPIL3Q9H2H8 161 aaKnown RBP3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 CD93Q9NPY3 652 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 TRMT1Q9NXH9 659 aaKnown RBP3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 SIX4Q9UIU6 781 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 TSPYL4Q9UJ04 414 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 PRAG1Q86YV5 1406 aa3.83□□□□□ -1.8
RNU6-88P-201ENST00000606801 KANSL1LA0AUZ9 987 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 TMEM8BA6NDV4 472 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 LACTBL1A8MY62 500 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 CTDSP2O14595 271 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 MITFO75030 526 aaPredicted RBP3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 LDB3O75112 727 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 ZNF217O75362 1048 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 ERAL1O75616 437 aaKnown RBP3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 TSPAN9O75954 239 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 CAMTA2O94983 1202 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 ADRB2P07550 413 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 MMP9P14780 707 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 RAD52P43351 418 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 SLC15A1P46059 708 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 KCNJ4P48050 445 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 MAD2L1Q13257 205 aaPredicted RBP3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 PDE1CQ14123 709 aaPredicted RBP3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 SYT16Q17RD7 645 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 RAB6CQ53S08 254 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 C9orf57Q5W0N0 161 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 KBTBD6Q86V97 674 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 TEX11Q8IYF3 940 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 POC5Q8NA72 575 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 MAGEC3Q8TD91 643 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 MTBPQ96DY7 904 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 RAB6CQ9H0N0 254 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 TMX4Q9H1E5 349 aaPredicted RBP3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 DDX31Q9H8H2 851 aaKnown RBP3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 LRRC4Q9HBW1 653 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 ANKEF1Q9NU02 776 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 ZNF224Q9NZL3 707 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 STK39Q9UEW8 545 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 FBXL2Q9UKC9 423 aa3.82□□□□□ -1.8
RNU6-88P-201ENST00000606801 PLAGL1Q9UM63 463 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms