RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 NUS1Q96E22 293 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 MFSD3Q96ES6 412 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 DNAJC1Q96KC8 554 aaKnown RBP11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 HSPA12BQ96MM6 686 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 TTC25Q96NG3 672 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 KLF6Q99612 283 aaPredicted RBP11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 FUT8Q9BYC5 575 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 PARD6BQ9BYG5 372 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 ABCG8Q9H221 673 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 PLAC1Q9HBJ0 212 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 SAYSD1Q9NPB0 183 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 IL26Q9NPH9 171 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 SMOXQ9NWM0 555 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 ZC3H7BQ9UGR2 993 aaKnown RBP11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 KCTD3Q9Y597 815 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 RPS6KL1Q9Y6S9 549 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 FAM169AQ9Y6X4 670 aa11.58□□□□□ -0.56
CHMP2A-207ENST00000600804 A0A0U1RQS6 177 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 A8MX80 341 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 PRAMEF26H0Y7S4 382 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 GAPDHSO14556 408 aaPredicted RBP11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 CBFA2T3O75081 653 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 TRIM16O95361 564 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 PAK4O96013 591 aaPredicted RBP11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 FTH1P19P0C7X4 201 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 MYBL2P10244 700 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 HNRNPA2B1P22626 353 aaKnown RBP11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 CD27P26842 260 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 MAOBP27338 520 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 ARNTP27540 789 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 NMBRP28336 390 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 TRIM23P36406 574 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 DPP6P42658 865 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 ARCN1P48444 511 aaKnown RBP11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 BNC1Q01954 994 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 SEMG2Q02383 582 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 MTM1Q13496 603 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 PEX6Q13608 980 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 SEPT6Q14141 434 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 FASTKD3Q14CZ7 662 aaKnown RBP11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 LRRC14Q15048 493 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 WSCD2Q2TBF2 565 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 COL28A1Q2UY09 1125 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 GPR33Q49SQ1 333 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 DENND2CQ68D51 928 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 ADAMTSL4Q6UY14 1074 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 UNC5AQ6ZN44 842 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 TRMT10CQ7L0Y3 403 aaKnown RBP11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 SLCO6A1Q86UG4 719 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 GPR26Q8NDV2 337 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 FBXO36Q8NEA4 188 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 OR13C4Q8NGS5 318 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 CEP76Q8TAP6 659 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 MDM1Q8TC05 714 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 AENQ8WTP8 325 aaKnown RBP11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 ADAMTS14Q8WXS8 1223 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 BIRC7Q96CA5 298 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 AP2M1Q96CW1 435 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 ZNF778Q96MU6 729 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 FCRL3Q96P31 734 aaPredicted RBP11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 VPS35Q96QK1 796 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 MOCS1Q9NZB8 636 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 CHMP2BQ9UQN3 213 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 MAD1L1Q9Y6D9 718 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 V9GYY5 206 aaPredicted RBP11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 ATMQ13315 3056 aa11.57□□□□□ -0.56
CHMP2A-207ENST00000600804 TRBV5-4A0A0C4DH59 114 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 GLYATL1P3A0A0U1RQE8 302 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 FAM47DPA6NHR8 397 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 BANF1O75531 89 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 SRP72O76094 671 aaKnown RBP11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 SOD1P00441 154 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 ABHD2P08910 425 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 AKT2P31751 481 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 ARSDP51689 593 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 ATXN3P54252 364 aaPredicted RBP11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 YPEL5P62699 121 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 PRAMEP78395 509 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 OVGP1Q12889 678 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 GRIK2Q13002 908 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 ITGA9Q13797 1035 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 BRD3Q15059 726 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 TRIP6Q15654 476 aaKnown RBP11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 LONRF1Q17RB8 773 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 ZNF423Q2M1K9 1284 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 WDR45BQ5MNZ6 344 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 PNCKQ6P2M8 343 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 AFTPHQ6ULP2 937 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 RFLNAQ6ZTI6 216 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 GALNT7Q86SF2 657 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 PDZD3Q86UT5 571 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 IQCHQ86VS3 1027 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 MARCH9Q86YJ5 346 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 NAXDQ8IW45 347 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 CNTN4Q8IWV2 1026 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 GPR150Q8NGU9 434 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 C1orf216Q8TAB5 229 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 GABPB2Q8TAK5 448 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms