RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 RALBP11234 206 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 JUNDP17535 347 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 EPHA8P29322 1005 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 MC4RP32245 332 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 EIF2B5Q13144 721 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 ELOCQ15369 112 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 ALG11Q2TAA5 492 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 KIAA0930Q6ICG6 404 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 CASC4Q6P4E1 433 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 CEP128Q6ZU80 1094 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 LMNTD2Q8IXW0 634 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 PHACTR4Q8IZ21 702 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 MPP5Q8N3R9 675 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 GABPB2Q8TAK5 448 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 STAMBPL1Q96FJ0 436 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 TTC25Q96NG3 672 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 CARD6Q9BX69 1037 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 FAM114A2Q9NRY5 505 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 SYBUQ9NX95 663 aa16.41■□□□□ 0.22
SHKBP1-219ENST00000599575 CFAP99D6REC4 459 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 F8W8V4 182 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 PFDN6O15212 129 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 INPP4BO15327 924 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 FLRT2O43155 660 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 KCNJ13O60928 360 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 PGAM1P18669 254 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 TERF1P54274 439 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 PTPRCAPQ14761 206 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 TPRG1LQ5T0D9 272 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 STPG1Q5TH74 334 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 LVRNQ6Q4G3 990 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 CENPUQ71F23 418 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 NXPE1Q8N323 547 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 NOA1Q8NC60 698 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 OR4L1Q8NH43 312 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 SAP25Q8TEE9 199 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 ART4Q93070 314 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 HDAC10Q969S8 669 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 COPS8Q99627 209 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 EBNA1BP2Q99848 306 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 FGF22Q9HCT0 170 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 GRHL1Q9NZI5 618 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 APOBEC3BQ9UH17 382 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 CRLS1Q9UJA2 301 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 GPR34Q9UPC5 381 aa16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 FNDC3AQ9Y2H6 1198 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-219ENST00000599575 E7ESA3 106 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 QSOX1O00391 747 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 TPP1O14773 563 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 CHUKO15111 745 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 NUAK1O60285 661 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 PIAS2O75928 621 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 CDK14O94921 469 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 ASMTLO95671 621 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 CTSEP14091 401 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 GRK6P43250 576 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 CRADDP78560 199 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 TMPRSS15P98073 1019 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 TMEM115Q12893 351 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 GTF2H3Q13889 308 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 ITIH4Q14624 930 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 ANKRD20A4Q4UJ75 823 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 GPRC6AQ5T6X5 926 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 MRNIPQ6NTE8 343 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 GALNT13Q8IUC8 556 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 HID1Q8IV36 788 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 KIAA2013Q8IYS2 634 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 OR6P1Q8NGX9 317 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 GDAP1Q8TB36 358 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 OR1E3Q8WZA6 343 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 ZNF778Q96MU6 729 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 TCF12Q99081 682 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 DUSP23Q9BVJ7 150 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 DPH5Q9H2P9 285 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 FSCN3Q9NQT6 498 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 MAD1L1Q9Y6D9 718 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 DNMT3AQ9Y6K1 912 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 RPS6KL1Q9Y6S9 549 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 LRRK1Q38SD2 2015 aa16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 PTPRZ1P23471 2315 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-219ENST00000599575 IGLV3-16A0A075B6K0 115 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 CCDC162PA2VCL2 907 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 C4orf47A7E2U8 309 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 BHMG1C9JSJ3 638 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 LMO7DNF2Z398 122 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 SCAMP1O15126 338 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 AQP9O43315 295 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 UGT1A9O60656 530 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 GSTM1P09488 218 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 ALPPL2P10696 532 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 UGT1A6P19224 532 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 MSH3P20585 1137 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 UGT1A1P22309 533 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 UGT1A4P22310 534 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 DGKAP23743 735 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 ACRV1P26436 265 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 UGT1A3P35503 534 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 UGT1A5P35504 534 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 PI4KAP42356 2102 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms