RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 HDDC3Q8N4P3 179 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 CKAP2Q8WWK9 683 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 TSPAN17Q96FV3 270 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 RIOK2Q9BVS4 552 aaKnown RBP23.15■■□□□ 1.3
SYMPK-212ENST00000598896 CCDC134Q9H6E4 229 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 GPAMQ9HCL2 828 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 ANKRD6Q9Y2G4 727 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 A6NNZ2 444 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 FADS2P1A8MWK0 482 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 WNT9AO14904 365 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 GSTA1P08263 222 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 PKMP14618 531 aaKnown RBP23.15■■□□□ 1.3
SYMPK-212ENST00000598896 SEC24CP53992 1094 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 IRX4P78413 519 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 IL9RQ01113 521 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 ITGA9Q13797 1035 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 TUBB8Q3ZCM7 444 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 TMEM92Q6UXU6 159 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 KYAT3Q6YP21 454 aaKnown RBP23.15■■□□□ 1.3
SYMPK-212ENST00000598896 ANKRD49Q8WVL7 239 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 DTD2Q96FN9 168 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 CCDC68Q9H2F9 335 aa23.15■■□□□ 1.3
SYMPK-212ENST00000598896 WDR91A4D1P6 747 aa23.14■■□□□ 1.29
SYMPK-212ENST00000598896 RGSL1A5PLK6 1076 aa23.14■■□□□ 1.29
SYMPK-212ENST00000598896 PRMT5O14744 637 aaPredicted RBP23.14■■□□□ 1.29
SYMPK-212ENST00000598896 PLIN3O60664 434 aa23.14■■□□□ 1.29
SYMPK-212ENST00000598896 NIPSNAP2O75323 286 aa23.14■■□□□ 1.29
SYMPK-212ENST00000598896 Q6ZS52 159 aa23.14■■□□□ 1.29
SYMPK-212ENST00000598896 RBFAQ8N0V3 343 aa23.14■■□□□ 1.29
SYMPK-212ENST00000598896 CLDN19Q8N6F1 224 aa23.14■■□□□ 1.29
SYMPK-212ENST00000598896 UNKQ9C0B0 810 aaKnown RBP23.14■■□□□ 1.29
SYMPK-212ENST00000598896 GALPQ9UBC7 116 aa23.14■■□□□ 1.29
SYMPK-212ENST00000598896 PRSS21Q9Y6M0 314 aa23.14■■□□□ 1.29
SYMPK-212ENST00000598896 IQCF5A8MTL0 148 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 RNASEH2AO75792 299 aaKnown RBP23.13■■□□□ 1.29
SYMPK-212ENST00000598896 RECQL5O94762 991 aaPredicted RBP23.13■■□□□ 1.29
SYMPK-212ENST00000598896 ESR1P03372 595 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 PROCP04070 461 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 SERPINB4P48594 390 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 B4GALNT1Q00973 533 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 LYPLAL1Q5VWZ2 237 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 ZNF687Q8N1G0 1237 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 PELI3Q8N2H9 469 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 TRAM1L1Q8N609 369 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 DTX3LQ8TDB6 740 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 NXNL1Q96CM4 212 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 UBXN10Q96LJ8 280 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 GPR78Q96P69 363 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 MECRQ9BV79 373 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 CDH19Q9H159 772 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 FBRSQ9HAH7 460 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 RAD18Q9NS91 495 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 SMOXQ9NWM0 555 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 SORCS3Q9UPU3 1222 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 A0A087X1B8 175 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 MAN2B1O00754 1011 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 RHOBTB1O94844 696 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 ZNF7P17097 686 aaPredicted RBP23.13■■□□□ 1.29
SYMPK-212ENST00000598896 PPARGP37231 505 aaPredicted RBP23.13■■□□□ 1.29
SYMPK-212ENST00000598896 CREB5Q02930 508 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 GABPB1Q06547 395 aaPredicted RBP23.13■■□□□ 1.29
SYMPK-212ENST00000598896 ZNF852Q6ZMS4 543 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 CYP2U1Q7Z449 544 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 NRSN1Q8IZ57 195 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 AP2M1Q96CW1 435 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 MAGEB18Q96M61 343 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 TTC1Q99614 292 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 SLC30A3Q99726 388 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 ZSCAN5AQ9BUG6 496 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 RABEP2Q9H5N1 569 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 ARHGEF3Q9NR81 526 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 IGSF5Q9NSI5 407 aa23.13■■□□□ 1.29
SYMPK-212ENST00000598896 AP1G1O43747 822 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 KLHL2O95198 593 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 CHRNB1P11230 501 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 COL6A2P12110 1019 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 ZNF37AP17032 561 aaPredicted RBP23.12■■□□□ 1.29
SYMPK-212ENST00000598896 RPS3P23396 243 aaKnown RBP eCLIP23.12■■□□□ 1.29
SYMPK-212ENST00000598896 GLRBP48167 497 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 CSHL1Q14406 222 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 PDK4Q16654 411 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 RAVER1Q8IY67 606 aaKnown RBP23.12■■□□□ 1.29
SYMPK-212ENST00000598896 CXorf40AQ8TE69 158 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 FAM131CQ96AQ9 280 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 ULK4Q96C45 1275 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 ZNF317Q96PQ6 595 aaPredicted RBP23.12■■□□□ 1.29
SYMPK-212ENST00000598896 GPR21Q99679 349 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 CLPBQ9H078 707 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 FBXL12Q9NXK8 326 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 ZDHHC3Q9NYG2 299 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 TAS2R13Q9NYV9 303 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 MMP17Q9ULZ9 603 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 PCDHB1Q9Y5F3 818 aa23.12■■□□□ 1.29
SYMPK-212ENST00000598896 IGLV3-16A0A075B6K0 115 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 SOD1P00441 154 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 DNTTP04053 509 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 CCDC166P0CW27 439 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 ZNF284Q2VY69 593 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 EOGTQ5NDL2 527 aa23.11■■□□□ 1.29
SYMPK-212ENST00000598896 GPRC6AQ5T6X5 926 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms