RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 EXOC3L1Q86VI1 746 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 NLRP8Q86W28 1048 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 RBFAQ8N0V3 343 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 ELMO2Q96JJ3 720 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 VPS35Q96QK1 796 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 NDNQ99608 321 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 C1QTNF7Q9BXJ2 289 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 TPSD1Q9BZJ3 242 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 CCDC68Q9H2F9 335 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 FAM53CQ9NYF3 392 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 ZDHHC3Q9NYG2 299 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 SLC39A10Q9ULF5 831 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 CYP8B1Q9UNU6 501 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 ACTL7BQ9Y614 415 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 DOCK9Q9BZ29 2069 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 A0A1W2PPM1 405 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 PRMT5O14744 637 aaPredicted RBP14.53□□□□□ -0.08
VRK3-212ENST00000596814 TPP1O14773 563 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 OR1I1O60431 355 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 ZNF217O75362 1048 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 SEMA4FO95754 770 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 SOD1P00441 154 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 ALDOAP04075 364 aaKnown RBP14.53□□□□□ -0.08
VRK3-212ENST00000596814 PYGLP06737 847 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 ZNF7P17097 686 aaPredicted RBP14.53□□□□□ -0.08
VRK3-212ENST00000596814 OAS2P29728 719 aaKnown RBP14.53□□□□□ -0.08
VRK3-212ENST00000596814 OXTRP30559 389 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 GPR1P46091 355 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 CXCL12P48061 93 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 SGCGQ13326 291 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 USP10Q14694 798 aaKnown RBP14.53□□□□□ -0.08
VRK3-212ENST00000596814 GPRC6AQ5T6X5 926 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 FAM45BPQ6NSW5 357 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 MTERF4Q7Z6M4 381 aaKnown RBP14.53□□□□□ -0.08
VRK3-212ENST00000596814 SLC41A1Q8IVJ1 513 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 PELI3Q8N2H9 469 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 CAMKK1Q8N5S9 505 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 ACVR1CQ8NER5 493 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 GDAP1Q8TB36 358 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 FAM45AQ8TCE6 357 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 KLK6Q92876 244 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 GLYATL1Q969I3 302 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 ISL2Q96A47 359 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 SERAC1Q96JX3 654 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 COPS8Q99627 209 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 C1QTNF2Q9BXJ5 285 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 SNX15Q9NRS6 342 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 DLGAP2Q9P1A6 1054 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 TMPRSS11EQ9UL52 423 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 VCANP13611 3396 aa14.53□□□□□ -0.08
VRK3-212ENST00000596814 K7ESM1 405 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 RFPL1O75677 317 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 PCCBP05166 539 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 AOC1P19801 751 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 SAT1P21673 171 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 FMO4P31512 558 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 POLD2P49005 469 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 SLC12A2P55011 1212 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 ADARP55265 1226 aaKnown RBP14.52□□□□□ -0.08
VRK3-212ENST00000596814 POU4F1Q01851 419 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 FGL2Q14314 439 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 LRRC14Q15048 493 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 HECTD2Q5U5R9 776 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 CMC1Q7Z7K0 106 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 TRIM69Q86WT6 500 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 PHYKPLQ8IUZ5 450 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 C4orf33Q8N1A6 199 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 DDHD1Q8NEL9 900 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 BTN2A2Q8WVV5 523 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 SMC6Q96SB8 1091 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 KLF6Q99612 283 aaPredicted RBP14.52□□□□□ -0.08
VRK3-212ENST00000596814 AARSD1Q9BTE6 412 aaKnown RBP14.52□□□□□ -0.08
VRK3-212ENST00000596814 BOCQ9BWV1 1114 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 SLC17A9Q9BYT1 436 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 CLPBQ9H078 707 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 CAB39LQ9H9S4 337 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 PCDHB1Q9Y5F3 818 aa14.52□□□□□ -0.08
VRK3-212ENST00000596814 IGLV3-16A0A075B6K0 115 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 GOLGA8RI6L899 631 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 PI15O43692 258 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 PAK4O96013 591 aaPredicted RBP14.52□□□□□ -0.09
VRK3-212ENST00000596814 ESR1P03372 595 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 PYGBP11216 843 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 PKMP14618 531 aaKnown RBP14.52□□□□□ -0.09
VRK3-212ENST00000596814 KRT4P19013 534 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 RPS3P23396 243 aaKnown RBP eCLIP14.52□□□□□ -0.09
VRK3-212ENST00000596814 TYK2P29597 1187 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 CD6P30203 668 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 MAT2AP31153 395 aaKnown RBP14.52□□□□□ -0.09
VRK3-212ENST00000596814 AKT1P31749 480 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 HPDP32754 393 aaPredicted RBP14.52□□□□□ -0.09
VRK3-212ENST00000596814 NSG1P42857 185 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 MAGEA12P43365 314 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 IRF4Q15306 451 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 WSCD2Q2TBF2 565 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 LDLRAP1Q5SW96 308 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 ZNF549Q6P9A3 640 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 TP53I13Q8NBR0 393 aaPredicted RBP14.52□□□□□ -0.09
VRK3-212ENST00000596814 ACMSDQ8TDX5 336 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 ASB12Q8WXK4 309 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms