RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 GJC1P36383 396 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 DSC2Q02487 901 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 CDC20Q12834 499 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 MMRN1Q13201 1228 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 TCEAL1Q15170 157 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 SKIDA1Q1XH10 827 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 ATP13A4Q4VNC1 1196 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 COLEC12Q5KU26 742 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.6□□□□□ -0.07
PNKP-202ENST00000593706 LRRC49Q8IUZ0 686 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 CNGA4Q8IV77 575 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 TEX26Q8N6G2 289 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 BMPERQ8N8U9 685 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 TC2NQ8N9U0 490 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 LPCAT1Q8NF37 534 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 C9orf43Q8TAL5 461 aaPredicted RBP14.6□□□□□ -0.07
PNKP-202ENST00000593706 SH3KBP1Q96B97 665 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 COX14Q96I36 57 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 SLC45A3Q96JT2 553 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 ZPBPQ9BS86 351 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 HERPUD2Q9BSE4 406 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 EFHD1Q9BUP0 239 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 TDRD1Q9BXT4 1180 aaKnown RBP14.6□□□□□ -0.07
PNKP-202ENST00000593706 SARS2Q9NP81 518 aaKnown RBP14.6□□□□□ -0.07
PNKP-202ENST00000593706 ZNHIT6Q9NWK9 470 aaKnown RBP14.6□□□□□ -0.07
PNKP-202ENST00000593706 LCMT1Q9UIC8 334 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 KCNK6Q9Y257 313 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 CHKBQ9Y259 395 aa14.6□□□□□ -0.07
PNKP-202ENST00000593706 TNRC6AQ8NDV7 1962 aaKnown RBP14.6□□□□□ -0.07
PNKP-202ENST00000593706 C1orf232A0A0U1RR37 186 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 AKR1B15C9JRZ8 316 aaPredicted RBP14.59□□□□□ -0.07
PNKP-202ENST00000593706 AKR1B10O60218 316 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 ACP5P13686 325 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 MAP4P27816 1152 aaKnown RBP14.59□□□□□ -0.07
PNKP-202ENST00000593706 GARSP41250 739 aaKnown RBP14.59□□□□□ -0.07
PNKP-202ENST00000593706 MC2RQ01718 297 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 PAFAH1B3Q15102 231 aaKnown RBP14.59□□□□□ -0.07
PNKP-202ENST00000593706 NCBP2-AS2Q69YL0 99 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 TIGD7Q6NT04 549 aaPredicted RBP14.59□□□□□ -0.07
PNKP-202ENST00000593706 SLC9B2Q86UD5 537 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 PHYKPLQ8IUZ5 450 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 UNC5BQ8IZJ1 945 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 SLC35G2Q8TBE7 412 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 ZNF670Q9BS34 389 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 DEF6Q9H4E7 631 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 ZNF71Q9NQZ8 489 aaPredicted RBP14.59□□□□□ -0.07
PNKP-202ENST00000593706 PDP2Q9P2J9 529 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 TBC1D29Q9UFV1 150 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 OAS3Q9Y6K5 1087 aaKnown RBP14.59□□□□□ -0.07
PNKP-202ENST00000593706 NBPF19A0A087WUL8 3843 aa14.59□□□□□ -0.07
PNKP-202ENST00000593706 TEX15Q9BXT5 2789 aa14.58□□□□□ -0.07
PNKP-202ENST00000593706 LOC101059948A0A1B0GTJ6 334 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 POLR1CO15160 346 aaPredicted RBP14.58□□□□□ -0.08
PNKP-202ENST00000593706 NKX2-8O15522 239 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 DNAJC6O75061 913 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 STK17BO94768 372 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 CLDN7O95471 211 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 TPM1P09493 284 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 F3P13726 295 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 CES1P23141 567 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 EPHA4P54764 986 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 GALNT2Q10471 571 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 HADHQ16836 314 aaKnown RBP14.58□□□□□ -0.08
PNKP-202ENST00000593706 ALG1LQ6GMV1 187 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 ARHGAP22Q7Z5H3 698 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 NLRP8Q86W28 1048 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 PQLC3Q8N755 202 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 STARD8Q92502 1023 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 CCDC42Q96M95 316 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.58□□□□□ -0.08
PNKP-202ENST00000593706 RBSNQ9H1K0 784 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 TRIT1Q9H3H1 467 aaKnown RBP14.58□□□□□ -0.08
PNKP-202ENST00000593706 OSGEPL1Q9H4B0 414 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 RMI1Q9H9A7 625 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 PCDH9Q9HC56 1237 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 APMAPQ9HDC9 416 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 FBXO8Q9NRD0 319 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 RBM22Q9NW64 420 aaKnown RBP eCLIP14.58□□□□□ -0.087e-6■■■□□ 17.4
PNKP-202ENST00000593706 PKD2L2Q9NZM6 624 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 ANAPC2Q9UJX6 822 aa14.58□□□□□ -0.08
PNKP-202ENST00000593706 PCYT1BQ9Y5K3 369 aaPredicted RBP14.58□□□□□ -0.08
PNKP-202ENST00000593706 KIR2DS5A0A0G2JLQ3 304 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 A0A0G2JNG1 304 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 C3orf70A6NLC5 250 aaPredicted RBP14.57□□□□□ -0.08
PNKP-202ENST00000593706 FADS2P1A8MWK0 482 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 KIR2DS3K7RE56 304 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 MATN3O15232 486 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 LCA5LO95447 670 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 KRT7P08729 469 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 FECHP22830 423 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 OAS2P29728 719 aaKnown RBP14.57□□□□□ -0.08
PNKP-202ENST00000593706 MC1RQ01726 317 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 ABHD18Q0P651 414 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 SEPT6Q14141 434 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 KIR2DS5Q14953 304 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 PDK2Q15119 407 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 IFI16Q16666 785 aaKnown RBP14.57□□□□□ -0.08
PNKP-202ENST00000593706 DEFB109BQ30KR1 87 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 ANKRD20A8PQ5CZ79 823 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 HENMT1Q5T8I9 393 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms