RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 GAPDHSO14556 408 aaPredicted RBP13.38□□□□□ -0.27
VMP1-217ENST00000593168 COPEO14579 308 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 TPP1O14773 563 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 NDUFS3O75489 264 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 ZWINTO95229 277 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 ADH1BP00325 375 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 F7P08709 466 aaPredicted RBP13.38□□□□□ -0.27
VMP1-217ENST00000593168 CHN1P15882 459 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 ITGALP20701 1170 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 C5AR1P21730 350 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 CRHR1P34998 444 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 PPARGP37231 505 aaPredicted RBP13.38□□□□□ -0.27
VMP1-217ENST00000593168 MMP12P39900 470 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 PSMD8P48556 350 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 NEK3P51956 506 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 METAP1P53582 386 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 DCDC1P59894 354 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 POU4F1Q01851 419 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 SEMG2Q02383 582 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 CCDC15Q0P6D6 951 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 CCINQ13939 588 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 USP10Q14694 798 aaKnown RBP13.38□□□□□ -0.27
VMP1-217ENST00000593168 SF3A2Q15428 464 aaKnown RBP13.38□□□□□ -0.27
VMP1-217ENST00000593168 CST6Q15828 149 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 CCDC6Q16204 474 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 INSCQ1MX18 579 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 POM121L1PQ3SYA9 428 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 TMEM52BQ4KMG9 183 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 ZRANB3Q5FWF4 1079 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 ZNF789Q5FWF6 425 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 N4BP2L1Q5TBK1 243 aaPredicted RBP13.38□□□□□ -0.27
VMP1-217ENST00000593168 LYPLAL1Q5VWZ2 237 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 PSAPL1Q6NUJ1 521 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 MICALCLQ6ZW33 695 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 CEP68Q76N32 757 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 LDB1Q86U70 411 aaPredicted RBP13.38□□□□□ -0.27
VMP1-217ENST00000593168 GPR26Q8NDV2 337 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 MDM1Q8TC05 714 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 ZNF398Q8TD17 642 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 ATXN7L3BQ96GX2 97 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 TTC1Q99614 292 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 ASB8Q9H765 288 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 SNX15Q9NRS6 342 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 RXFP3Q9NSD7 469 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 DCDC2Q9UHG0 476 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 ANGPTL2Q9UKU9 493 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 SLC39A10Q9ULF5 831 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 SPAG17Q6Q759 2223 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 TM4SF5O14894 197 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 AXIN1O15169 862 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 TM9SF1O15321 606 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 ADAM23O75077 832 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 PRAMEF1O95521 474 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 KLF8O95600 359 aaPredicted RBP13.37□□□□□ -0.27
VMP1-217ENST00000593168 C2P06681 752 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 ADRB3P13945 408 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 STMN1P16949 149 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 CRABP2P29373 138 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 ABCG1P45844 678 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 ADARP55265 1226 aaKnown RBP13.37□□□□□ -0.27
VMP1-217ENST00000593168 RPS14P62263 151 aaKnown RBP13.37□□□□□ -0.27
VMP1-217ENST00000593168 CREB5Q02930 508 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 NFATC2Q13469 925 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 PDE1CQ14123 709 aaPredicted RBP13.37□□□□□ -0.27
VMP1-217ENST00000593168 ZKSCAN8Q15776 578 aaPredicted RBP13.37□□□□□ -0.27
VMP1-217ENST00000593168 CHRNA6Q15825 494 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 LRRC73Q5JTD7 316 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 HECTD2Q5U5R9 776 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 ZNF776Q68DI1 518 aaPredicted RBP13.37□□□□□ -0.27
VMP1-217ENST00000593168 FAM45BPQ6NSW5 357 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 FAM151BQ6UXP7 276 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 LIPIQ6XZB0 460 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 CYP2U1Q7Z449 544 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 HSD11B1LQ7Z5J1 315 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 CCDC91Q7Z6B0 441 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 TECPR1Q7Z6L1 1165 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 LCA5Q86VQ0 697 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 WDR5BQ86VZ2 330 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 PIANPQ8IYJ0 282 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 NRSN1Q8IZ57 195 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 TXNDC5Q8NBS9 432 aaKnown RBP13.37□□□□□ -0.27
VMP1-217ENST00000593168 FAM45AQ8TCE6 357 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 TCP10LQ8TDR4 215 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 LPGAT1Q92604 370 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 TSPAN17Q96FV3 270 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 OMDQ99983 421 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 CAPS2Q9BXY5 557 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 ARRDC1-AS1Q9H2J1 176 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 INTS9Q9NV88 658 aaKnown RBP13.37□□□□□ -0.27
VMP1-217ENST00000593168 VWA7Q9Y334 891 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 COMMD10Q9Y6G5 202 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 SCN8AQ9UQD0 1980 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 ZNF106Q9H2Y7 1883 aaKnown RBP13.37□□□□□ -0.27
VMP1-217ENST00000593168 FRYQ5TBA9 3013 aa13.37□□□□□ -0.27
VMP1-217ENST00000593168 A0A096LPK6 155 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 A0A1W2PQF6 199 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 SPINT1O43278 529 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 AP1G1O43747 822 aa13.36□□□□□ -0.27
VMP1-217ENST00000593168 FOXD2O60548 495 aaPredicted RBP13.36□□□□□ -0.27
VMP1-217ENST00000593168 GLRA3O75311 464 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms