RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 HMGB1P1B2RPK0 211 aaPredicted RBP11.85□□□□□ -0.51
DDX39A-219ENST00000592927 MMP20O60882 483 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 ATXN1LP0C7T5 689 aaKnown RBP11.85□□□□□ -0.51
DDX39A-219ENST00000592927 ELFN1P0C7U0 828 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 ADRA1DP25100 572 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 ATP5DP30049 168 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 MAT2AP31153 395 aaKnown RBP11.85□□□□□ -0.51
DDX39A-219ENST00000592927 HOXD12P35452 270 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 CHRNA4P43681 627 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 LIG3P49916 1009 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 PPP2CBP62714 309 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 PPP2CAP67775 309 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 SGCGQ13326 291 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 MTM1Q13496 603 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 NAB1Q13506 487 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 OLIG2Q13516 323 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 ARHGEF7Q14155 803 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 PTPRRQ15256 657 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 WDR45BQ5MNZ6 344 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 CERCAMQ5T4B2 595 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 UBAP2Q5T6F2 1119 aaKnown RBP11.85□□□□□ -0.51
DDX39A-219ENST00000592927 SEL1L3Q68CR1 1132 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 NLRP9Q7RTR0 991 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 TMEM135Q86UB9 458 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 SLC41A1Q8IVJ1 513 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 RGL4Q8IZJ4 473 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 PPHLN1Q8NEY8 458 aaKnown RBP11.85□□□□□ -0.51
DDX39A-219ENST00000592927 UHMK1Q8TAS1 419 aaKnown RBP11.85□□□□□ -0.51
DDX39A-219ENST00000592927 FBF1Q8TES7 1133 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 BIRC7Q96CA5 298 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 SRPK1Q96SB4 655 aaKnown RBP11.85□□□□□ -0.51
DDX39A-219ENST00000592927 APOL2Q9BQE5 337 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 KIFC1Q9BW19 673 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 ZFR2Q9UPR6 939 aaKnown RBP11.85□□□□□ -0.51
DDX39A-219ENST00000592927 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.85□□□□□ -0.51
DDX39A-219ENST00000592927 PLXNB3Q9ULL4 1909 aa11.85□□□□□ -0.51
DDX39A-219ENST00000592927 HEATR9A2RTY3 570 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 RGS16O15492 202 aaPredicted RBP11.84□□□□□ -0.51
DDX39A-219ENST00000592927 LATO43561 262 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 LZTS3O60299 673 aaPredicted RBP11.84□□□□□ -0.51
DDX39A-219ENST00000592927 TM7SF2O76062 418 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 IGHV4-34P06331 123 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 PIRTP0C851 137 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 NUDT1P36639 197 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 RALGDSQ12967 914 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 CAMK2BQ13554 666 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 CRYMQ14894 314 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 ZNF284Q2VY69 593 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 TMEM259Q4ZIN3 620 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 SETMARQ53H47 684 aaPredicted RBP11.84□□□□□ -0.51
DDX39A-219ENST00000592927 CRTC1Q6UUV9 634 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 PCSK4Q6UW60 755 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 CAPN12Q6ZSI9 719 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 GLRX5Q86SX6 157 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 TSPAN33Q86UF1 283 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 FAM181AQ8N9Y4 354 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 CDKL2Q92772 493 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 KLK6Q92876 244 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 PEX13Q92968 403 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 ATP6V1G3Q96LB4 118 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 SMIM14Q96QK8 99 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 LYSMD1Q96S90 227 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 C1QTNF7Q9BXJ2 289 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 SLC17A9Q9BYT1 436 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 MAGEE1Q9HCI5 957 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 MOCS1Q9NZB8 636 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 VPS18Q9P253 973 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 LGALS13Q9UHV8 139 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 RIMKLBQ9ULI2 386 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 TCAF1Q9Y4C2 921 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 RPS6KL1Q9Y6S9 549 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 FAM169AQ9Y6X4 670 aa11.84□□□□□ -0.51
DDX39A-219ENST00000592927 C1orf232A0A0U1RR37 186 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 TLDC2A0PJX2 215 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 FAM159BA6NKW6 160 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 C10orf142B7Z368 130 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 H3BQF6 201 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 SLC31A1O15431 190 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 CBFA2T3O75081 653 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 WISP1O95388 367 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 PAK4O96013 591 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-219ENST00000592927 SYPP08247 313 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 C6P13671 934 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 ZNF30P17039 623 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 PAMP19021 973 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 LHCGRP22888 699 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 CD27P26842 260 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 MAOBP27338 520 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 MSH2P43246 934 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 CRADDP78560 199 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 ACOX1Q15067 660 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 CNGA3Q16281 694 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 LONRF1Q17RB8 773 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 ANKRD20A4Q4UJ75 823 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 LRRC66Q68CR7 880 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 LIPIQ6XZB0 460 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 LRRC6Q86X45 466 aa11.83□□□□□ -0.52
DDX39A-219ENST00000592927 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.83□□□□□ -0.52
DDX39A-219ENST00000592927 GABPB2Q8TAK5 448 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-219ENST00000592927 BLOC1S5Q8TDH9 187 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms