RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 HOXB3P14651 431 aaPredicted RBP13.74□□□□□ -0.21
APOC1-208ENST00000592535 ZNF8P17098 575 aaPredicted RBP13.74□□□□□ -0.21
APOC1-208ENST00000592535 PTPN7P35236 360 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 UGT1A5P35504 534 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 RWDD2BP57060 319 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 OTUD4Q01804 1114 aaKnown RBP13.74□□□□□ -0.21
APOC1-208ENST00000592535 TLE3Q04726 772 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 ZFP36L1Q07352 338 aaKnown RBP13.74□□□□□ -0.21
APOC1-208ENST00000592535 EIF3IQ13347 325 aaKnown RBP13.74□□□□□ -0.21
APOC1-208ENST00000592535 BIRC2Q13490 618 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 MAP9Q49MG5 647 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 SIRPB2Q5JXA9 342 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 SLITRK4Q8IW52 837 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 SLC25A41Q8N5S1 370 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 SPC24Q8NBT2 197 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 IPMKQ8NFU5 416 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 ACTL9Q8TC94 416 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 KCNE4Q8WWG9 221 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 ALG3Q92685 438 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 SRPK1Q96SB4 655 aaKnown RBP13.74□□□□□ -0.21
APOC1-208ENST00000592535 FAM118BQ9BPY3 351 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 DESI2Q9BSY9 194 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 ZSCAN5AQ9BUG6 496 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 CARD9Q9H257 536 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 SEMA6CQ9H3T2 930 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 PRORYQ9H606 182 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 RMI1Q9H9A7 625 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 BPIFA1Q9NP55 256 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 TRIM10Q9UDY6 481 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 RSPH14Q9UHP6 348 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 KCNK6Q9Y257 313 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 EFR3BQ9Y2G0 817 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 GRID2O43424 1007 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 SLC25A14O95258 325 aaPredicted RBP13.73□□□□□ -0.21
APOC1-208ENST00000592535 CPNE6O95741 557 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 EPOP01588 193 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 ITGA2BP08514 1039 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 PYGMP11217 842 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 CD1CP29017 333 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 CDC25BP30305 580 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 MLLT3P42568 568 aaPredicted RBP13.73□□□□□ -0.21
APOC1-208ENST00000592535 MPP3Q13368 585 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 USP53Q70EK8 1073 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 ADGRG6Q86SQ4 1221 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 CLEC14AQ86T13 490 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 ZNF761Q86XN6 746 aaPredicted RBP13.73□□□□□ -0.21
APOC1-208ENST00000592535 TTC30BQ8N4P2 665 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 SLC37A2Q8TED4 501 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 GLYATL1Q969I3 302 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 GORASP1Q9BQQ3 440 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 NUDT22Q9BRQ3 303 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 OR2AG1Q9H205 316 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 GBA3Q9H227 469 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 TRIM39Q9HCM9 518 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 TBC1D29Q9UFV1 150 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 TRHDEQ9UKU6 1024 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 LOXL2Q9Y4K0 774 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 ADGRG1Q9Y653 693 aa13.73□□□□□ -0.21
APOC1-208ENST00000592535 ZNF106Q9H2Y7 1883 aaKnown RBP13.73□□□□□ -0.21
APOC1-208ENST00000592535 ITPR1Q14643 2758 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 KLK10O43240 276 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 MTX2O75431 263 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 RBP3P10745 1247 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 HMGCLP35914 325 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 TNNT3P45378 269 aaPredicted RBP13.72□□□□□ -0.21
APOC1-208ENST00000592535 GPR3P46089 330 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 FASLGP48023 281 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 EIF3EP60228 445 aaKnown RBP13.72□□□□□ -0.21
APOC1-208ENST00000592535 SLC1A5Q15758 541 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 KHDC1Q4VXA5 237 aaKnown RBP13.72□□□□□ -0.21
APOC1-208ENST00000592535 PHF19Q5T6S3 580 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 NKAIN2Q5VXU1 208 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 PDPK2PQ6A1A2 396 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 CRTC3Q6UUV7 619 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 ZNF574Q6ZN55 896 aaPredicted RBP13.72□□□□□ -0.21
APOC1-208ENST00000592535 PIM3Q86V86 326 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 PHYKPLQ8IUZ5 450 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 CDKL3Q8IVW4 592 aaPredicted RBP13.72□□□□□ -0.21
APOC1-208ENST00000592535 SFRP1Q8N474 314 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 BLOC1S5Q8TDH9 187 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 FCRL3Q96P31 734 aaPredicted RBP13.72□□□□□ -0.21
APOC1-208ENST00000592535 PLEKHG4BQ96PX9 1271 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 TRABDQ9H4I3 376 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 IMPACTQ9P2X3 320 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 PISDQ9UG56 409 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 AMFRQ9UKV5 643 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 TMPRSS11EQ9UL52 423 aa13.72□□□□□ -0.21
APOC1-208ENST00000592535 PACSIN2Q9UNF0 486 aaPredicted RBP13.72□□□□□ -0.21
APOC1-208ENST00000592535 LAMA5O15230 3695 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 IGHV1OR21-1A0A087WYE8 117 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 A6NCN8 305 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 KCNN4O15554 427 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 ZW10O43264 779 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 BUD23O43709 281 aaKnown RBP13.71□□□□□ -0.21
APOC1-208ENST00000592535 SNX2O60749 519 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 JMJD7P0C870 316 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 ITIH1P19827 911 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 HLA-DPA1P20036 260 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 SLC5A2P31639 672 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 CSF2RBP32927 897 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms