RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 PLEKHM1Q9Y4G2 1056 aa10.33□□□□□ -0.76
VPS4B-207ENST00000591519 SETXQ7Z333 2677 aaKnown RBP10.33□□□□□ -0.76
VPS4B-207ENST00000591519 ASH1LQ9NR48 2969 aaKnown RBP10.33□□□□□ -0.76
VPS4B-207ENST00000591519 SSU72P8A0A1W2PR75 194 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 GOLGA6CA6NDK9 693 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 GOLGA6BA6NDN3 693 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 B4E171 279 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 STMND1H3BQB6 276 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 MFSD11O43934 449 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 DNAJC6O75061 913 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 PROSCO94903 275 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 CLDN7O95471 211 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 H2AFZP0C0S5 128 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 GOLGA6DP0CG33 693 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 THRAP10827 490 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 WT1P19544 449 aaPredicted RBP10.32□□□□□ -0.76
VPS4B-207ENST00000591519 MX2P20592 715 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 CA4P22748 312 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 TSPAN7P41732 249 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 SPINT3P49223 89 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 EPHB1P54762 984 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 DSC2Q02487 901 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 ITKQ08881 620 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 NIPAL4Q0D2K0 466 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 SLC10A2Q12908 348 aaPredicted RBP10.32□□□□□ -0.76
VPS4B-207ENST00000591519 ASTE1Q2TB18 679 aaPredicted RBP10.32□□□□□ -0.76
VPS4B-207ENST00000591519 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.32□□□□□ -0.76
VPS4B-207ENST00000591519 H2AFVQ71UI9 128 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 CPNE8Q86YQ8 564 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 PQLC3Q8N755 202 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 ZSCAN1Q8NBB4 408 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 KCTD6Q8NC69 237 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 AGBL5Q8NDL9 886 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 RCBTB1Q8NDN9 531 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 ZNF564Q8TBZ8 553 aaPredicted RBP10.32□□□□□ -0.76
VPS4B-207ENST00000591519 CTNNBL1Q8WYA6 563 aaPredicted RBP10.32□□□□□ -0.76
VPS4B-207ENST00000591519 NKD1Q969G9 470 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 HDAC11Q96DB2 347 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 CCDC74BQ96LY2 380 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 RIOK2Q9BVS4 552 aaKnown RBP10.32□□□□□ -0.76
VPS4B-207ENST00000591519 DDA1Q9BW61 102 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 SPRY4Q9C004 299 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 SUDS3Q9H7L9 328 aaPredicted RBP10.32□□□□□ -0.76
VPS4B-207ENST00000591519 RMI1Q9H9A7 625 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 STARD5Q9NSY2 213 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 GOLGA6AQ9NYA3 693 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 UVRAGQ9P2Y5 699 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 LCMT1Q9UIC8 334 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 SDK2Q58EX2 2172 aa10.32□□□□□ -0.76
VPS4B-207ENST00000591519 ZFC3H1O60293 1989 aaKnown RBP10.32□□□□□ -0.76
VPS4B-207ENST00000591519 TENM4Q6N022 2769 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 ZNF487B1APH4 448 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 ANKRD66B4E2M5 251 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 KRT7P08729 469 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 CSF2RBP32927 897 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 BIRC2Q13490 618 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 TBR1Q16650 682 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 HENMT1Q5T8I9 393 aaKnown RBP10.31□□□□□ -0.76
VPS4B-207ENST00000591519 NKAIN2Q5VXU1 208 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 IYDQ6PHW0 289 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 DOK6Q6PKX4 331 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 WDR74Q6RFH5 385 aaPredicted RBP10.31□□□□□ -0.76
VPS4B-207ENST00000591519 ARHGAP22Q7Z5H3 698 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 VSIG1Q86XK7 387 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 GALNT13Q8IUC8 556 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 BMPERQ8N8U9 685 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 EXTL1Q92935 676 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 MLPHQ9BV36 600 aaPredicted RBP10.31□□□□□ -0.76
VPS4B-207ENST00000591519 SLC12A9Q9BXP2 914 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 ASPSCR1Q9BZE9 553 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 FAM83DQ9H4H8 585 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 PCDH9Q9HC56 1237 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 SARS2Q9NP81 518 aaKnown RBP10.31□□□□□ -0.76
VPS4B-207ENST00000591519 KCNK4Q9NYG8 393 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 TFR2Q9UP52 801 aa10.31□□□□□ -0.76
VPS4B-207ENST00000591519 A6NCN8 305 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 SOWAHDA6NJG2 315 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 AGRPO00253 132 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 INPP4BO15327 924 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 EML2O95834 649 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 F12P00748 615 aaPredicted RBP10.3□□□□□ -0.76
VPS4B-207ENST00000591519 HLA-DQB2P05538 268 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 MMP2P08253 660 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 KDELR1P24390 212 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 CSTF2P33240 577 aaKnown RBP eCLIP10.3□□□□□ -0.76
VPS4B-207ENST00000591519 UGT1A3P35503 534 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 CLCNKAP51800 687 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 TAS2R40P59535 323 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 GBE1Q04446 702 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 PPIDQ08752 370 aaKnown RBP10.3□□□□□ -0.76
VPS4B-207ENST00000591519 QPCTQ16769 361 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 TRIM74Q86UV6 250 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 VASH2Q86V25 355 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 CCDC13Q8IYE1 715 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 CNTD1Q8N815 330 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 CCDC112Q8NEF3 446 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 OR10G6Q8NH81 332 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 CCHCR1Q8TD31 782 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 SLC37A2Q8TED4 501 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 HTR3CQ8WXA8 447 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms