RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ACRV1P26436 265 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 CD38P28907 300 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 PMLP29590 882 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 PPARGP37231 505 aaPredicted RBP15.05■□□□□ -0
ATG4D-211ENST00000589753 SEMA3AQ14563 771 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 LDLRAP1Q5SW96 308 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 GPRC6AQ5T6X5 926 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 LYPLAL1Q5VWZ2 237 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 ZNF470Q6ECI4 717 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 CERS6Q6ZMG9 384 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 Q6ZSR6 202 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 SDCCAG8Q86SQ7 713 aaPredicted RBP15.05■□□□□ -0
ATG4D-211ENST00000589753 SERPINA9Q86WD7 417 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 MFSD2AQ8NA29 543 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 DDHD1Q8NEL9 900 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 FBF1Q8TES7 1133 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 UBLCP1Q8WVY7 318 aaPredicted RBP15.05■□□□□ -0
ATG4D-211ENST00000589753 CDKL2Q92772 493 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 FUBP1Q96AE4 644 aaKnown RBP15.05■□□□□ -0
ATG4D-211ENST00000589753 COX14Q96I36 57 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 LGR4Q9BXB1 951 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 IRF2BPLQ9H1B7 796 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 KCNH6Q9H252 994 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 ZFATQ9P243 1243 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 SUSD2Q9UGT4 822 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 PILRBQ9UKJ0 227 aa15.05■□□□□ -0
ATG4D-211ENST00000589753 ATXN2Q99700 1313 aaKnown RBP15.05■□□□□ -0
ATG4D-211ENST00000589753 ABCA7Q8IZY2 2146 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 TNRC6BQ9UPQ9 1833 aaKnown RBP15.04■□□□□ -0
ATG4D-211ENST00000589753 A0A087WUV0 522 aaPredicted RBP15.04■□□□□ -0
ATG4D-211ENST00000589753 A0A1W2PR77 199 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 PRR5-ARHGAP8B1AHC4 643 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 PFDN6O15212 129 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 ABHD2P08910 425 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 THEGLP0DJG4 465 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 HTR1BP28222 390 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 DPP6P42658 865 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 SLC1A2P43004 574 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 TTPAP49638 278 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 AFF3P51826 1226 aaKnown RBP15.04■□□□□ -0
ATG4D-211ENST00000589753 KIAA1024LP59773 190 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 OVGP1Q12889 678 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 LPAL2Q16609 132 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 DBN1Q16643 649 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 TEDDM1Q5T9Z0 273 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 LDB1Q86U70 411 aaPredicted RBP15.04■□□□□ -0
ATG4D-211ENST00000589753 TRIM74Q86UV6 250 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 IQCHQ86VS3 1027 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 CILP2Q8IUL8 1156 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 SYT12Q8IV01 421 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 DENND6AQ8IWF6 608 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 CNTN4Q8IWV2 1026 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 OR13H1Q8NG92 308 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 SCG3Q8WXD2 468 aaKnown RBP15.04■□□□□ -0
ATG4D-211ENST00000589753 PIGKQ92643 395 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 KLHDC7BQ96G42 594 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 TCF12Q99081 682 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 COPS8Q99627 209 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 FUT8Q9BYC5 575 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 ARFGAP3Q9NP61 516 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 ZDHHC3Q9NYG2 299 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 RAB23Q9ULC3 237 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 FANCMQ8IYD8 2048 aa15.04■□□□□ -0
ATG4D-211ENST00000589753 A0A1B0GTW7 788 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 FAM159BA6NKW6 160 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 MAGEC1O60732 1142 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 MTX2O75431 263 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 NDUFS3O75489 264 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 ASMTLO95671 621 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 WNT1P04628 370 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 MSH3P20585 1137 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 KELP23276 732 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 AKT1P31749 480 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 THOP1P52888 689 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 CTBP1Q13363 440 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 PDE1CQ14123 709 aaPredicted RBP15.03■□□□□ -0
ATG4D-211ENST00000589753 PTK2BQ14289 1009 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 SLC29A2Q14542 456 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 ITIH4Q14624 930 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 NFATC4Q14934 902 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 TEAD4Q15561 434 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 TYSND1Q2T9J0 566 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 KBTBD12Q3ZCT8 623 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 ZNF648Q5T619 568 aaPredicted RBP15.03■□□□□ -0
ATG4D-211ENST00000589753 RNF187Q5TA31 235 aaPredicted RBP15.03■□□□□ -0
ATG4D-211ENST00000589753 PEAR1Q5VY43 1037 aaPredicted RBP15.03■□□□□ -0
ATG4D-211ENST00000589753 DCP2Q8IU60 420 aaKnown RBP15.03■□□□□ -0
ATG4D-211ENST00000589753 MREGQ8N565 214 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 PNPLA1Q8N8W4 532 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 C2CD4AQ8NCU7 369 aaPredicted RBP15.03■□□□□ -0
ATG4D-211ENST00000589753 UHMK1Q8TAS1 419 aaKnown RBP15.03■□□□□ -0
ATG4D-211ENST00000589753 HEXDCQ8WVB3 486 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 ATOH1Q92858 354 aaPredicted RBP15.03■□□□□ -0
ATG4D-211ENST00000589753 SKA1Q96BD8 255 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 DCUN1D1Q96GG9 259 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 LOXL4Q96JB6 756 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 CYTH2Q99418 400 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 ZCCHC2Q9C0B9 1178 aaKnown RBP15.03■□□□□ -0
ATG4D-211ENST00000589753 EPB41L4BQ9H329 900 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 ACSS3Q9H6R3 686 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms