RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 GABPB2Q8TAK5 448 aaPredicted RBP19.41■□□□□ 0.7
CIRBP-220ENST00000588917 GDAP1Q8TB36 358 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 ZNF778Q96MU6 729 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 TTC25Q96NG3 672 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 LGR4Q9BXB1 951 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 ZCCHC2Q9C0B9 1178 aaKnown RBP19.41■□□□□ 0.7
CIRBP-220ENST00000588917 GAREM1Q9H706 876 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 RMI1Q9H9A7 625 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 TREX1Q9NSU2 369 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 SMOXQ9NWM0 555 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 VPS18Q9P253 973 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 KLQ9UEF7 1012 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 MTRF1LQ9UGC7 380 aaKnown RBP19.41■□□□□ 0.7
CIRBP-220ENST00000588917 CRLS1Q9UJA2 301 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 RPS6KL1Q9Y6S9 549 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 PLXNA2O75051 1894 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 BHMG1C9JSJ3 638 aaPredicted RBP19.4■□□□□ 0.7
CIRBP-220ENST00000588917 INPP4BO15327 924 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 UGT1A9O60656 530 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 USP1O94782 785 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 ASMTLO95671 621 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 TNFP01375 233 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 CSF2P04141 144 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 RALBP11234 206 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 UGT1A6P19224 532 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 UGT1A1P22309 533 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 UGT1A4P22310 534 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 NMBRP28336 390 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 UGT1A3P35503 534 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 UGT1A5P35504 534 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 SRP54P61011 504 aaKnown RBP19.4■□□□□ 0.7
CIRBP-220ENST00000588917 HNRNPKP61978 463 aaKnown RBP eCLIP19.4■□□□□ 0.7
CIRBP-220ENST00000588917 BNC1Q01954 994 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 CUL1Q13616 776 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 SF3A2Q15428 464 aaKnown RBP19.4■□□□□ 0.7
CIRBP-220ENST00000588917 AASDHQ4L235 1098 aaPredicted RBP19.4■□□□□ 0.7
CIRBP-220ENST00000588917 ANKRD20A4Q4UJ75 823 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 FASTKD1Q53R41 847 aaKnown RBP19.4■□□□□ 0.7
CIRBP-220ENST00000588917 LAYNQ6UX15 382 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 MPP5Q8N3R9 675 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 FBXO25Q8TCJ0 367 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 GTPBP2Q9BX10 602 aaKnown RBP19.4■□□□□ 0.7
CIRBP-220ENST00000588917 SMOC1Q9H4F8 434 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 UGT1A7Q9HAW7 530 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 UGT1A10Q9HAW8 530 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 UGT1A8Q9HAW9 530 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 SLC2A6Q9UGQ3 507 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 DGKBQ9Y6T7 804 aa19.4■□□□□ 0.7
CIRBP-220ENST00000588917 LRRK1Q38SD2 2015 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 LNP1A1A4G5 178 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 CCDC78A2IDD5 438 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 CCDC162PA2VCL2 907 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 TMEM202A6NGA9 273 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 E7ESA3 106 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 GAPDHSO14556 408 aaPredicted RBP19.39■□□□□ 0.69
CIRBP-220ENST00000588917 PFDN6O15212 129 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 RASGRP1O95267 797 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 PDIA2Q13087 525 aaKnown RBP19.39■□□□□ 0.69
CIRBP-220ENST00000588917 SUZ12Q15022 739 aaKnown RBP19.39■□□□□ 0.69
CIRBP-220ENST00000588917 AARS2Q5JTZ9 985 aaKnown RBP19.39■□□□□ 0.69
CIRBP-220ENST00000588917 KIAA0930Q6ICG6 404 aaPredicted RBP19.39■□□□□ 0.69
CIRBP-220ENST00000588917 TAS2R42Q7RTR8 314 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 SDCCAG8Q86SQ7 713 aaPredicted RBP19.39■□□□□ 0.69
CIRBP-220ENST00000588917 DDHD1Q8NEL9 900 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 IFT81Q8WYA0 676 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 MFSD3Q96ES6 412 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 SLC13A1Q9BZW2 595 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 SUDS3Q9H7L9 328 aaPredicted RBP19.39■□□□□ 0.69
CIRBP-220ENST00000588917 DNAJC28Q9NX36 388 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 SLC17A4Q9Y2C5 497 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 TEX264Q9Y6I9 313 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 FAM169AQ9Y6X4 670 aa19.39■□□□□ 0.69
CIRBP-220ENST00000588917 A0A1B0GTQ1 180 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 ESYT3A0FGR9 886 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 CFAP99D6REC4 459 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 CDK14O94921 469 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 VAPBO95292 243 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 CEACAM5P06731 702 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 IVLP07476 585 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 RHOXF2BP0C7M4 288 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 ZNF883P0CG24 379 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 NME1P15531 152 aaKnown RBP19.38■□□□□ 0.69
CIRBP-220ENST00000588917 ELK3P41970 407 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 ARSDP51689 593 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 HK3P52790 923 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 TMEM115Q12893 351 aaPredicted RBP19.38■□□□□ 0.69
CIRBP-220ENST00000588917 GTF2H3Q13889 308 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 MSS51Q4VC12 460 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 SPANXN3Q5MJ09 141 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 TCEAL6Q6IPX3 200 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 MRNIPQ6NTE8 343 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 ZDHHC24Q6UX98 284 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 LMNTD2Q8IXW0 634 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 NXPE1Q8N323 547 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 SDR16C5Q8N3Y7 309 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 MINDY1Q8N5J2 469 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 PYROXD1Q8WU10 500 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 TCEAL3Q969E4 200 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 ZNF669Q96BR6 464 aaPredicted RBP19.38■□□□□ 0.69
CIRBP-220ENST00000588917 DCUN1D1Q96GG9 259 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms