RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 C10orf142B7Z368 130 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 F8W8V4 182 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 TOP3BO95985 862 aaKnown RBP13.75□□□□□ -0.21
TRAF4-215ENST00000584944 POLBP06746 335 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 HOXC4P09017 264 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-215ENST00000584944 C1QTNF9P0C862 333 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 GM2AP17900 193 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 MSH3P20585 1137 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 RPL21P46778 160 aaKnown RBP13.75□□□□□ -0.21
TRAF4-215ENST00000584944 SLC7A5Q01650 507 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 FOXC1Q12948 553 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 FZD2Q14332 565 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 HLTFQ14527 1009 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRAF4-215ENST00000584944 PTPRCAPQ14761 206 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 GPR33Q49SQ1 333 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 FASTKD1Q53R41 847 aaKnown RBP13.75□□□□□ -0.21
TRAF4-215ENST00000584944 ZNF542PQ5EBM4 170 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 AARS2Q5JTZ9 985 aaKnown RBP13.75□□□□□ -0.21
TRAF4-215ENST00000584944 PRAMEF14Q5SWL7 426 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 AFTPHQ6ULP2 937 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 UNQ6494/PRO21346Q6UXR6 183 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 CEP128Q6ZU80 1094 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 CENPUQ71F23 418 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 MARK2Q7KZI7 788 aaKnown RBP13.75□□□□□ -0.21
TRAF4-215ENST00000584944 TRIM74Q86UV6 250 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 GALNT13Q8IUC8 556 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 DEFB124Q8NES8 71 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 PEX13Q92968 403 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 AGAP2Q99490 1192 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 NAT9Q9BTE0 207 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 TMEM121BQ9BXQ6 578 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-215ENST00000584944 CARS2Q9HA77 564 aaKnown RBP13.75□□□□□ -0.21
TRAF4-215ENST00000584944 CYP4F12Q9HCS2 524 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 SPASTQ9UBP0 616 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 APOBEC3BQ9UH17 382 aaKnown RBP13.75□□□□□ -0.21
TRAF4-215ENST00000584944 ZNHIT2Q9UHR6 403 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 TMEM98Q9Y2Y6 226 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 IGF2RP11717 2491 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 ADAMTS9Q9P2N4 1935 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 CCL22O00626 93 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 TNFRSF10CO14798 259 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 ALPPL2P10696 532 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 VCLP18206 1134 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 SPINK2P20155 84 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 GNPDA1P46926 289 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 PLTPP55058 493 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 IL9RQ01113 521 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 CACNG1Q06432 222 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 ILF3Q12906 894 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRAF4-215ENST00000584944 NFATC2Q13469 925 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 PEX6Q13608 980 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 THOC5Q13769 683 aaKnown RBP13.74□□□□□ -0.21
TRAF4-215ENST00000584944 ELOCQ15369 112 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 ATP13A5Q4VNC0 1218 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 PRRT3Q5FWE3 981 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 HIBCHQ6NVY1 386 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-215ENST00000584944 KDM7AQ6ZMT4 941 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 SNX20Q7Z614 316 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 SDCCAG8Q86SQ7 713 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-215ENST00000584944 PIP4P1Q86T03 277 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 CAND1Q86VP6 1230 aaKnown RBP13.74□□□□□ -0.21
TRAF4-215ENST00000584944 CCDC25Q86WR0 208 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 SPATS2Q86XZ4 545 aaKnown RBP13.74□□□□□ -0.21
TRAF4-215ENST00000584944 CCNJLQ8IV13 435 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 PHACTR4Q8IZ21 702 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 SLC22A18ASQ8N1D0 253 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 DTX3LQ8TDB6 740 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 SETD7Q8WTS6 366 aaKnown RBP13.74□□□□□ -0.21
TRAF4-215ENST00000584944 HEXDCQ8WVB3 486 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 IFT81Q8WYA0 676 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 HDAC10Q969S8 669 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 TSACCQ96A04 125 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-215ENST00000584944 CDKN2AIPNLQ96HQ2 116 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 VPS35Q96QK1 796 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 LGR4Q9BXB1 951 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 OR2AG1Q9H205 316 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 FAM114A2Q9NRY5 505 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 TM7SF3Q9NS93 570 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 VPS18Q9P253 973 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 MTRF1LQ9UGC7 380 aaKnown RBP13.74□□□□□ -0.21
TRAF4-215ENST00000584944 RIMKLBQ9ULI2 386 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 SOX13Q9UN79 622 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 GPSM3Q9Y4H4 160 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 RPS6KL1Q9Y6S9 549 aa13.74□□□□□ -0.21
TRAF4-215ENST00000584944 ZZEF1O43149 2961 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 PRSS38A1L453 326 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 FADS2P1A8MWK0 482 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 GPR89AB7ZAQ6 455 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 VEGFDO43915 354 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 UGT1A9O60656 530 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 SDC3O75056 442 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 CDK14O94921 469 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 TTC4O95801 387 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 CSF2P04141 144 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 GPR89BP0CG08 455 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 NME1P15531 152 aaKnown RBP13.73□□□□□ -0.21
TRAF4-215ENST00000584944 PGAM1P18669 254 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 UGT1A6P19224 532 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 UGT1A1P22309 533 aa13.73□□□□□ -0.21
TRAF4-215ENST00000584944 UGT1A4P22310 534 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms