RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 SCAND2PQ9GZW5 306 aaPredicted RBP6.16□□□□□ -1.42
TVP23B-210ENST00000582288 LRRC19Q9H756 370 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 PDE7BQ9NP56 450 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 AGPAT4Q9NRZ5 378 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 GPR83Q9NYM4 423 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 SEMA5BQ9P283 1151 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 MAP10Q9P2G4 905 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 CPNE7Q9UBL6 633 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 EPHA6Q9UF33 1036 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 CNOT8Q9UFF9 292 aaKnown RBP6.16□□□□□ -1.42
TVP23B-210ENST00000582288 LNPEPQ9UIQ6 1025 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 FARSAQ9Y285 508 aaKnown RBP6.16□□□□□ -1.42
TVP23B-210ENST00000582288 COPG1Q9Y678 874 aaKnown RBP6.16□□□□□ -1.42
TVP23B-210ENST00000582288 TACC2O95359 2948 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 ARHGEF17Q96PE2 2063 aaPredicted RBP6.16□□□□□ -1.42
TVP23B-210ENST00000582288 DCHS2Q6V1P9 2916 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 SETD2Q9BYW2 2564 aaPredicted RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 HIVEP3Q5T1R4 2406 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 A0A1B0GUH1 482 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 C2CD4BA6NLJ0 364 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 EIF3CLB5ME19 914 aaKnown RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 LRRTM2O43300 516 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 KRT86O43790 486 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 PALMO75781 387 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 UBXN7O94888 489 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 FGFR1OPO95684 399 aaKnown RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 EML2O95834 649 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 SOD1P00441 154 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 PROCP04070 461 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 ALPPP05187 535 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 RAB40ALP0C0E4 278 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 EDN3P14138 238 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 CYP11B1P15538 503 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 NELFEP18615 380 aaKnown RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 SLC9A1P19634 815 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 CAPN3P20807 821 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 ETV3P41162 512 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 GPR1P46091 355 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 GCGRP47871 477 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 RENBPP51606 427 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 VAV2P52735 878 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 HDAC4P56524 1084 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 UBE2IP63279 158 aaKnown RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 SH3BP2P78314 561 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 ATP11AP98196 1134 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 NFATC2Q13469 925 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 PNOCQ13519 176 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 IL10RAQ13651 578 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 PLEKHN1Q494U1 663 aaPredicted RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 CCDC14Q49A88 953 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 RALGPS1Q5JS13 557 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 GBP6Q6ZN66 633 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 Q6ZVL8 140 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 HSD11B1LQ7Z5J1 315 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 TECPR1Q7Z6L1 1165 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 SLFN11Q7Z7L1 901 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 KMT5CQ86Y97 462 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 RBM12BQ8IXT5 1001 aaKnown RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 ELOA2Q8IYF1 753 aaPredicted RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 AOPEPQ8N6M6 819 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 ARFGAP1Q8N6T3 406 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 PAF1Q8N7H5 531 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 TSEN2Q8NCE0 465 aaKnown RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 OR8K5Q8NH50 307 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 EXD1Q8NHP7 514 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 COG1Q8WTW3 980 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 TM9SF4Q92544 642 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 UBXN4Q92575 508 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 SMARCE1Q969G3 411 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 SCRN2Q96FV2 425 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 ZDHHC12Q96GR4 267 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 PSKH2Q96QS6 385 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 MCCC1Q96RQ3 725 aaPredicted RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 EIF3CQ99613 913 aaKnown RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 USB1Q9BQ65 265 aaKnown RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 KRTAP4-12Q9BQ66 201 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 PDCL3Q9H2J4 239 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 SUDS3Q9H7L9 328 aaPredicted RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 CHST11Q9NPF2 352 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 WASH6PQ9NQA3 447 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 LATS2Q9NRM7 1088 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 OGFRQ9NZT2 677 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 TBC1D29Q9UFV1 150 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 KLHL3Q9UH77 587 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 HOOK1Q9UJC3 728 aaKnown RBP6.15□□□□□ -1.42
TVP23B-210ENST00000582288 RARRES3Q9UL19 164 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 PPIL1Q9Y3C6 166 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 PLEKHM1Q9Y4G2 1056 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 POLQO75417 2590 aa6.15□□□□□ -1.42
TVP23B-210ENST00000582288 TRBV23OR9-2A0A075B6M9 112 aa6.14□□□□□ -1.43
TVP23B-210ENST00000582288 ARHGAP42A6NI28 874 aa6.14□□□□□ -1.43
TVP23B-210ENST00000582288 A8MX80 341 aa6.14□□□□□ -1.43
TVP23B-210ENST00000582288 GPR89AB7ZAQ6 455 aa6.14□□□□□ -1.43
TVP23B-210ENST00000582288 PRSS44E7EML9 344 aa6.14□□□□□ -1.43
TVP23B-210ENST00000582288 J3KR12 359 aa6.14□□□□□ -1.43
TVP23B-210ENST00000582288 FOXN3O00409 490 aaPredicted RBP6.14□□□□□ -1.43
TVP23B-210ENST00000582288 DNAJC6O75061 913 aa6.14□□□□□ -1.43
TVP23B-210ENST00000582288 CPNE3O75131 537 aaKnown RBP6.14□□□□□ -1.43
TVP23B-210ENST00000582288 JCHAINP01591 159 aa6.14□□□□□ -1.43
TVP23B-210ENST00000582288 IGHEP01854 428 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms