RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 SLCO1B1Q9Y6L6 691 aa3.42□□□□□ -1.86
CDH19-204ENST00000579658 GON4LQ3T8J9 2241 aa3.42□□□□□ -1.86
CDH19-204ENST00000579658 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 A0A0D9SEW6 157 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 LY6G6EA0A0G2JKS1 128 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 MKRN2OSH3BPM6 223 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 STMND1H3BQB6 276 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 MYO1FO00160 1098 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 LRCH4O75427 683 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 KIAA0754O94854 1291 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 APOEP02649 317 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 SLC4A1P02730 911 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 CD48P09326 243 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 MYZAPP0CAP1 466 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 POLR2EP19388 210 aaKnown RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 PAX7P23759 505 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 MAN1A1P33908 653 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 STT3AP46977 705 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 SLC11A2P49281 568 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 SEC24CP53992 1094 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 ADPRHP54922 357 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 DRG2P55039 364 aaKnown RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 EIF3BP55884 814 aaKnown RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 SNX16P57768 344 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 ITKQ08881 620 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 ZNF844Q08AG5 666 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 ZNF177Q13360 481 aaPredicted RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 MESDQ14696 234 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 SETDB1Q15047 1291 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 LLGL1Q15334 1064 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 PPP2R5EQ16537 467 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 HNRNPA1L2Q32P51 320 aaKnown RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 CEP85LQ5SZL2 805 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 NUGGCQ68CJ6 796 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 NXNQ6DKJ4 435 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 TTC19Q6DKK2 380 aaPredicted RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 TCTN3Q6NUS6 607 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 ESRP1Q6NXG1 681 aaKnown RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 LAYNQ6UX15 382 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 ARCQ7LC44 396 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 STRADAQ7RTN6 431 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 MAATS1Q7Z4T9 603 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 ZNF438Q7Z4V0 828 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 TFAP2DQ7Z6R9 452 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 NT5DC3Q86UY8 548 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 TEX19Q8NA77 164 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 MAGEC3Q8TD91 643 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 CYB5D2Q8WUJ1 264 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 P3H4Q92791 437 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 KIAA1143Q96AT1 154 aaPredicted RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 VMP1Q96GC9 406 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 BTN2A3PQ96KV6 586 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 RPRD1AQ96P16 312 aaPredicted RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 DPYSL5Q9BPU6 564 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 CNPY3Q9BT09 278 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 SNRNP25Q9BV90 132 aaKnown RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 BOCQ9BWV1 1114 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 TRIT1Q9H3H1 467 aaKnown RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 ZWILCHQ9H900 591 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 ABCB8Q9NUT2 735 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 ETNK2Q9NVF9 386 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 CTTNBP2NLQ9P2B4 639 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 ZNF212Q9UDV6 495 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 MCM8Q9UJA3 840 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 PACSIN2Q9UNF0 486 aaPredicted RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 PCDHGA3Q9Y5H0 932 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 HS3ST3A1Q9Y663 406 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 U3KQA8 63 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 NUMA1Q14980 2115 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 A0A1W2PNU3 283 aaPredicted RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 GOLGA6L10A6NI86 522 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 F5H5T6 163 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 K7ESM1 405 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 RNF103O00237 685 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 PGRMC1O00264 195 aaKnown RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 PLRG1O43660 514 aaKnown RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 SNAP91O60641 907 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 LRIG2O94898 1065 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 F9P00740 461 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 TMEM253P0C7T8 217 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 RARAP10276 462 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 PABPC1P11940 636 aaKnown RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 PNLIPP16233 465 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 TGM2P21980 687 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 ENPP1P22413 925 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 CSKP41240 450 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 STK19P49842 368 aaPredicted RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 PWP1Q13610 501 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 FAM209AQ5JX71 171 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 MANEALQ5VSG8 457 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 CXorf57Q6NSI4 855 aaKnown RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 GK5Q6ZS86 529 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 CHST9Q7L1S5 443 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 VASH1Q7L8A9 365 aaPredicted RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 TMC3Q7Z5M5 1100 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 CCDC91Q7Z6B0 441 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 ADIPOR2Q86V24 386 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 VPS36Q86VN1 386 aa3.41□□□□□ -1.86
CDH19-204ENST00000579658 CCDC117Q8IWD4 279 aaPredicted RBP3.41□□□□□ -1.86
CDH19-204ENST00000579658 SRRM1Q8IYB3 904 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms