RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ALPIP09923 528 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 OR56A5P0C7T3 313 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 CEBPBP17676 345 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 MPSTP25325 297 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 ACRV1P26436 265 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 VIPR1P32241 457 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 PGM1P36871 562 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 NFATC2Q13469 925 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 HERC3Q15034 1050 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 EIF4HQ15056 248 aaKnown RBP11.04□□□□□ -0.64
SKA2-204ENST00000578519 SLC5A9Q2M3M2 681 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 PSAPL1Q6NUJ1 521 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 ERAP2Q6P179 960 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 METTL2BQ6P1Q9 378 aaKnown RBP11.04□□□□□ -0.64
SKA2-204ENST00000578519 TTC23LQ6PF05 361 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 FAM151BQ6UXP7 276 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 MACC1Q6ZN28 852 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 CUZD1Q86UP6 607 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 YAF2Q8IY57 180 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 KIF2BQ8N4N8 673 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 CPSF7Q8N684 471 aaKnown RBP11.04□□□□□ -0.64
SKA2-204ENST00000578519 PTGR2Q8N8N7 351 aaPredicted RBP11.04□□□□□ -0.64
SKA2-204ENST00000578519 VN1R2Q8NFZ6 395 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 OR6K2Q8NGY2 324 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 RP9Q8TA86 221 aaKnown RBP11.04□□□□□ -0.64
SKA2-204ENST00000578519 GRIN3AQ8TCU5 1115 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 SMARCD2Q92925 531 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 ZNF707Q96C28 371 aaPredicted RBP11.04□□□□□ -0.64
SKA2-204ENST00000578519 DCUN1D1Q96GG9 259 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 BIRC8Q96P09 236 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 MCCC1Q96RQ3 725 aaPredicted RBP11.04□□□□□ -0.64
SKA2-204ENST00000578519 SERPINI1Q99574 410 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 COPS8Q99627 209 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 EBF4Q9BQW3 602 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 TRIM54Q9BYV2 358 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 P2RY12Q9H244 342 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 LINC00597Q9H2U6 94 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 BRD9Q9H8M2 597 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 CYP4F12Q9HCS2 524 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 MRPL40Q9NQ50 206 aaKnown RBP11.04□□□□□ -0.64
SKA2-204ENST00000578519 SPATS2LQ9NUQ6 558 aaKnown RBP11.04□□□□□ -0.64
SKA2-204ENST00000578519 NUDT4Q9NZJ9 180 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 DKK3Q9UBP4 350 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 ZDHHC2Q9UIJ5 367 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 CLEC4EQ9ULY5 219 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 FNDC3AQ9Y2H6 1198 aaKnown RBP11.04□□□□□ -0.64
SKA2-204ENST00000578519 TRAF6Q9Y4K3 522 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 WNT6Q9Y6F9 365 aa11.04□□□□□ -0.64
SKA2-204ENST00000578519 PRR5-ARHGAP8B1AHC4 643 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 BTN3A1O00481 513 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 PER2O15055 1255 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 GRID2O43424 1007 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 ZNF821O75541 412 aaPredicted RBP11.03□□□□□ -0.64
SKA2-204ENST00000578519 PRAMEF12O95522 483 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 PRNPP04156 253 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 UGT2B4P06133 528 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 CHRNGP07510 517 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 ENO3P13929 434 aaPredicted RBP11.03□□□□□ -0.64
SKA2-204ENST00000578519 BPIP17213 487 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 GMPRP36959 345 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 CTSOP43234 321 aaPredicted RBP11.03□□□□□ -0.64
SKA2-204ENST00000578519 STK19P49842 368 aaPredicted RBP11.03□□□□□ -0.64
SKA2-204ENST00000578519 STX1BP61266 288 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 NTHL1P78549 312 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 ARHGAP8P85298 464 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 KDSRQ06136 332 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 TUBB3Q13509 450 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 CAMK1Q14012 370 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 PFKFB4Q16877 469 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 GEN1Q17RS7 908 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 ZNF697Q5TEC3 545 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 CRTC1Q6UUV9 634 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 TMEM207Q6UWW9 146 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 C16orf89Q6UX73 402 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 DPY19L3Q6ZPD9 716 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 RBM23Q86U06 439 aaKnown RBP11.03□□□□□ -0.64
SKA2-204ENST00000578519 ADIPOR2Q86V24 386 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 PIM3Q86V86 326 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 PIANPQ8IYJ0 282 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 LSMEM2Q8N112 164 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 PLCD3Q8N3E9 789 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 CPA6Q8N4T0 437 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 OR56A4Q8NGH8 313 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 LINGO1Q96FE5 620 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 KLHL32Q96NJ5 620 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 ATOH8Q96SQ7 321 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 RTKNQ9BST9 563 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 NUSAP1Q9BXS6 441 aaKnown RBP11.03□□□□□ -0.64
SKA2-204ENST00000578519 FAM126AQ9BYI3 521 aaPredicted RBP11.03□□□□□ -0.64
SKA2-204ENST00000578519 NUF2Q9BZD4 464 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 CIPCQ9C0C6 399 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 SARS2Q9NP81 518 aaKnown RBP11.03□□□□□ -0.64
SKA2-204ENST00000578519 IL26Q9NPH9 171 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 LATS2Q9NRM7 1088 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 KCTD5Q9NXV2 234 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 TAS2R1Q9NYW7 299 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 CD274Q9NZQ7 290 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 ARMCX1Q9P291 453 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 DEC1Q9P2X7 70 aa11.03□□□□□ -0.64
SKA2-204ENST00000578519 IL36AQ9UHA7 158 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms