RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 PHF19Q5T6S3 580 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 ATP1A1-AS1Q5TC04 95 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 FAXCQ5TGI0 409 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 FAM72AQ5TYM5 149 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 MANEALQ5VSG8 457 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 ATL3Q6DD88 541 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 KLHL10Q6JEL2 608 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 FAM72DQ6L9T8 149 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 ESRP1Q6NXG1 681 aaKnown RBP3.97□□□□□ -1.77
PTPRM-206ENST00000578093 FOXR2Q6PJQ5 311 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 C11orf57Q6ZUT1 292 aaPredicted RBP3.97□□□□□ -1.77
PTPRM-206ENST00000578093 SLC26A9Q7LBE3 791 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 RD3Q7Z3Z2 195 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 BNIPLQ7Z465 357 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 SETD3Q86TU7 594 aaPredicted RBP3.97□□□□□ -1.77
PTPRM-206ENST00000578093 FAM72BQ86X60 149 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 FAM131BQ86XD5 332 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 ZSWIM9Q86XI8 627 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 SCUBE1Q8IWY4 988 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 LILRA2Q8N149 483 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 RYBPQ8N488 228 aaPredicted RBP3.97□□□□□ -1.77
PTPRM-206ENST00000578093 PCDH20Q8N6Y1 951 aaKnown RBP3.97□□□□□ -1.77
PTPRM-206ENST00000578093 PLA2G15Q8NCC3 412 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 OR2AP1Q8NGE2 309 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 WDR48Q8TAF3 677 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 ZNF564Q8TBZ8 553 aaPredicted RBP3.97□□□□□ -1.77
PTPRM-206ENST00000578093 PATE1Q8WXA2 126 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 ASB12Q8WXK4 309 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 OR1E3Q8WZA6 343 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 ARHGEF2Q92974 986 aaKnown RBP3.97□□□□□ -1.77
PTPRM-206ENST00000578093 MAP6Q96JE9 813 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 FEM1CQ96JP0 617 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 EXOC2Q96KP1 924 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 PTCHD1Q96NR3 888 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 TSG101Q99816 390 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 NUDT22Q9BRQ3 303 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 TRIM62Q9BVG3 475 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 LGR4Q9BXB1 951 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 SLC13A1Q9BZW2 595 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 STRADBQ9C0K7 418 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 KLC2Q9H0B6 622 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 PIF1Q9H611 641 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 FGF22Q9HCT0 170 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 UBE2TQ9NPD8 197 aaPredicted RBP3.97□□□□□ -1.77
PTPRM-206ENST00000578093 MRPL40Q9NQ50 206 aaKnown RBP3.97□□□□□ -1.77
PTPRM-206ENST00000578093 ZNF71Q9NQZ8 489 aaPredicted RBP3.97□□□□□ -1.77
PTPRM-206ENST00000578093 MBNL3Q9NUK0 354 aaKnown RBP3.97□□□□□ -1.77
PTPRM-206ENST00000578093 ASNSD1Q9NWL6 643 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 ERVK13-1Q9NX77 482 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 TMEM9Q9P0T7 183 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 HECAQ9UBI9 543 aaPredicted RBP3.97□□□□□ -1.77
PTPRM-206ENST00000578093 SLC12A6Q9UHW9 1150 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 CFAP45Q9UL16 551 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 GPR34Q9UPC5 381 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 CTNND2Q9UQB3 1225 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 ZNF281Q9Y2X9 895 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 OR1A2Q9Y585 309 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 PAXBP1Q9Y5B6 917 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 ZFHX3Q15911 3703 aa3.97□□□□□ -1.77
PTPRM-206ENST00000578093 ILVBLA1L0T0 632 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 KRIT1O00522 736 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 NEMP1O14524 444 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 PRRG2O14669 202 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 P4HA2O15460 535 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 MTSS1O43312 755 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 TBX1O43435 398 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 B4GAT1O43505 415 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 SRGAP2O75044 1071 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 TM7SF2O76062 418 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 TMCC1O94876 653 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 RASGRP1O95267 797 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 GSRP00390 522 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 HPXP02790 462 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 NTRK1P04629 796 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 FAM153BP0C7A2 387 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 PRKAR1AP10644 381 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 SLC2A3P11169 496 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 FGF3P11487 239 aaPredicted RBP3.96□□□□□ -1.78
PTPRM-206ENST00000578093 SLC9A1P19634 815 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 OAS2P29728 719 aaKnown RBP3.96□□□□□ -1.78
PTPRM-206ENST00000578093 UGT1A3P35503 534 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 CASRP41180 1078 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 RGRP47804 291 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 GFRA1P56159 465 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 STX17P56962 302 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 OR1D5P58170 312 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 RNASE9P60153 205 aaKnown RBP3.96□□□□□ -1.78
PTPRM-206ENST00000578093 YPEL5P62699 121 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 SUMO1P63165 101 aaKnown RBP3.96□□□□□ -1.78
PTPRM-206ENST00000578093 KRT85P78386 507 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 B4GALNT1Q00973 533 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 SLC6A3Q01959 620 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 DEUP1Q05D60 604 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 MAP4K2Q12851 820 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 RALGDSQ12967 914 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 SGCGQ13326 291 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 MORC3Q14149 939 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 PTK2BQ14289 1009 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 HLTFQ14527 1009 aaKnown RBP eCLIP3.96□□□□□ -1.78
PTPRM-206ENST00000578093 ELOCQ15369 112 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms