RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 CDH7Q9ULB5 785 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 ZC3H4Q9UPT8 1303 aaKnown RBP4.41□□□□□ -1.7
CDH8-205ENST00000577730 CYB561D2O14569 222 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 ZNF432O94892 652 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 AP2A1O95782 977 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 FABP3P05413 133 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 SPATA31D3P0C874 917 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 PRKAR2AP13861 404 aaKnown RBP4.41□□□□□ -1.7
CDH8-205ENST00000577730 MSR1P21757 451 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 RXRBP28702 533 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 HOXA13P31271 388 aaPredicted RBP4.41□□□□□ -1.7
CDH8-205ENST00000577730 HTR7P34969 479 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 RAB5CP51148 216 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 P2RX3P56373 397 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 POU6F1Q14863 301 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 SPATA31D4Q6ZUB0 917 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 ANKS3Q6ZW76 656 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 OR13J1Q8NGT2 312 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 URGCPQ8TCY9 931 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 BCL7CQ8WUZ0 217 aaPredicted RBP4.41□□□□□ -1.7
CDH8-205ENST00000577730 SLC38A4Q969I6 547 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 AURKBQ96GD4 344 aaPredicted RBP4.41□□□□□ -1.7
CDH8-205ENST00000577730 RIPOR3Q96MK2 946 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 ERVK-6Q9BXR3 956 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 NLNQ9BYT8 704 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 ATXN3LQ9H3M9 355 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 CDHR5Q9HBB8 845 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 TBC1D22BQ9NU19 505 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 B3GNT2Q9NY97 397 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 ERVK-18Q9QC07 812 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 ZNF225Q9UK10 706 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 AXIN2Q9Y2T1 843 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 AAR2Q9Y312 384 aaKnown RBP4.41□□□□□ -1.7
CDH8-205ENST00000577730 PCDHGB6Q9Y5F9 930 aa4.41□□□□□ -1.7
CDH8-205ENST00000577730 TEX46H3BTG2 121 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 MSI1O43347 362 aaKnown RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 CHP2O43745 196 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 PIAS1O75925 651 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 KRT33AO76009 404 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 OAZ2O95190 189 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 ATE1O95260 518 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 WDPCPO95876 746 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 CDK1P06493 297 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 UBL4AP11441 157 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 ADORA2BP29275 332 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 ACSL1P33121 698 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 RBM34P42696 430 aaKnown RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 ZNF132P52740 706 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 OXA1LQ15070 435 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 MEP1AQ16819 746 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 RNASEH2BQ5TBB1 312 aaKnown RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 MACC1Q6ZN28 852 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.4□□□□□ -1.7
CDH8-205ENST00000577730 SLC5A11Q8WWX8 675 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 METTL2AQ96IZ6 378 aaKnown RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 ZFP42Q96MM3 310 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 PI4K2AQ9BTU6 479 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 MTFR1LQ9H019 292 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 C8orf33Q9H7E9 229 aaPredicted RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 FOLH1BQ9HBA9 442 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 ADGRE2Q9UHX3 823 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 HCN2Q9UL51 889 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 NPHP4O75161 1426 aaPredicted RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 ARPC2O15144 300 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 CCNDBP1O95273 360 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 MT-ND1P03886 318 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 MYF6P23409 242 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 CHRNA5P30532 468 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 MAGEA6P43360 314 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 CDK8P49336 464 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 HK3P52790 923 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 AP2S1P53680 142 aaPredicted RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 EEFSECP57772 596 aaKnown RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 GPR68Q15743 365 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 C21orf62-AS1Q17RA5 79 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 PAN3Q58A45 887 aaKnown RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 SMIM5Q71RC9 77 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 PEG10Q86TG7 708 aaKnown RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 KBTBD6Q86V97 674 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 ZNF781Q8N8C0 355 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 TRIM43Q96BQ3 446 aaPredicted RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 MAP6Q96JE9 813 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 TIGARQ9NQ88 270 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 IL20Q9NYY1 176 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 MAST1Q9Y2H9 1570 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 E9PI62 339 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 H3BUI4 141 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 AZIN1O14977 448 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 ZBTB24O43167 697 aaPredicted RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 AP1G1O43747 822 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 XPNPEP2O43895 674 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 NOBOXO60393 691 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 SLC22A3O75751 556 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 LDOC1O95751 146 aaPredicted RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 IFNA17P01571 189 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 RB1P06400 928 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 SRCP12931 536 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 GM2AP17900 193 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 S100PP25815 95 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 GRIA1P42261 906 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms