RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 IVLP07476 585 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 F7P08709 466 aaPredicted RBP9.69□□□□□ -0.86
NDE1-212ENST00000577101 ZNF8P17098 575 aaPredicted RBP9.69□□□□□ -0.86
NDE1-212ENST00000577101 ADRA1DP25100 572 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 MC4RP32245 332 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 LMAN1P49257 510 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 THOP1P52888 689 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 CTSCP53634 463 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 ITGA8P53708 1063 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 SEPT6Q14141 434 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 DHX34Q14147 1143 aaKnown RBP9.69□□□□□ -0.86
NDE1-212ENST00000577101 PTK2BQ14289 1009 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 PPP1R7Q15435 360 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 PYCR3Q53H96 274 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 DUPD1Q68J44 220 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 ZDHHC24Q6UX98 284 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 GVINP1Q7Z2Y8 2422 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 RD3Q7Z3Z2 195 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 C11orf96Q7Z7L8 435 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 HID1Q8IV36 788 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 SPNS2Q8IVW8 549 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 PPIL6Q8IXY8 311 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 DNAAF3Q8N9W5 541 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 DEFB124Q8NES8 71 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 C19orf43Q9BQ61 176 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 LRRC1Q9BTT6 524 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 ZSCAN5AQ9BUG6 496 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 KIFC1Q9BW19 673 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 BOCQ9BWV1 1114 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 TRIM31Q9BZY9 425 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 CYP4F12Q9HCS2 524 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 PHPT1Q9NRX4 125 aaPredicted RBP9.69□□□□□ -0.86
NDE1-212ENST00000577101 SMOXQ9NWM0 555 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 TOR4AQ9NXH8 423 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 MARCH4Q9P2E8 410 aaPredicted RBP9.69□□□□□ -0.86
NDE1-212ENST00000577101 GULP1Q9UBP9 304 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 KLQ9UEF7 1012 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 SLC23A2Q9UGH3 650 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 APOBEC3BQ9UH17 382 aaKnown RBP9.69□□□□□ -0.86
NDE1-212ENST00000577101 ASIC3Q9UHC3 531 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 PCOLCE2Q9UKZ9 415 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 RIMKLBQ9ULI2 386 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 SOX13Q9UN79 622 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 SNX24Q9Y343 169 aa9.69□□□□□ -0.86
NDE1-212ENST00000577101 IGLV3-16A0A075B6K0 115 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 ZCWPW2A0A1B0GU75 182 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 DCDC2BA2VCK2 349 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 C2orf81A6NN90 581 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 CACNB4O00305 520 aaPredicted RBP9.68□□□□□ -0.86
NDE1-212ENST00000577101 CHUKO15111 745 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 ZNF500O60304 480 aaPredicted RBP9.68□□□□□ -0.86
NDE1-212ENST00000577101 FOXD2O60548 495 aaPredicted RBP9.68□□□□□ -0.86
NDE1-212ENST00000577101 GOT2P00505 430 aaKnown RBP9.68□□□□□ -0.86
NDE1-212ENST00000577101 MLNP12872 115 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 AK4P27144 223 aaPredicted RBP9.68□□□□□ -0.86
NDE1-212ENST00000577101 ADCY8P40145 1251 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 ARCN1P48444 511 aaKnown RBP9.68□□□□□ -0.86
NDE1-212ENST00000577101 NPY2RP49146 381 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 ATXN3P54252 364 aaPredicted RBP9.68□□□□□ -0.86
NDE1-212ENST00000577101 ARHGAP8P85298 464 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 CDK16Q00536 496 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 SLC7A5Q01650 507 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 PPARDQ03181 441 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 DHX9Q08211 1270 aaKnown RBP9.68□□□□□ -0.86
NDE1-212ENST00000577101 SLC14A1Q13336 389 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 NFATC2Q13469 925 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 SMAD1Q15797 465 aaKnown RBP9.68□□□□□ -0.86
NDE1-212ENST00000577101 WHAMMP3Q1A5X7 153 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 PROX2Q3B8N5 592 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 ZNF658BQ4V348 819 aaPredicted RBP9.68□□□□□ -0.86
NDE1-212ENST00000577101 PRRT3Q5FWE3 981 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 PCID2Q5JVF3 399 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 GPRC6AQ5T6X5 926 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 PDPK2PQ6A1A2 396 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 SYDE1Q6ZW31 735 aaPredicted RBP9.68□□□□□ -0.86
NDE1-212ENST00000577101 MARK2Q7KZI7 788 aaKnown RBP9.68□□□□□ -0.86
NDE1-212ENST00000577101 NAXDQ8IW45 347 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 UNC5BQ8IZJ1 945 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 MMGT1Q8N4V1 131 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 OXR1Q8N573 874 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 EID2Q8N6I1 236 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 RASGEF1AQ8N9B8 481 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 DDHD1Q8NEL9 900 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 ZNF398Q8TD17 642 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 GPBAR1Q8TDU6 330 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 LMX1AQ8TE12 382 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 HDAC10Q969S8 669 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 SKA1Q96BD8 255 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 CDH19Q9H159 772 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 OR2AG1Q9H205 316 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 DPH5Q9H2P9 285 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 ASB8Q9H765 288 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 TRIM39Q9HCM9 518 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 IL1RAPL1Q9NZN1 696 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 DMGDHQ9UI17 866 aaKnown RBP9.68□□□□□ -0.86
NDE1-212ENST00000577101 PKP3Q9Y446 797 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 PRSS21Q9Y6M0 314 aa9.68□□□□□ -0.86
NDE1-212ENST00000577101 RIF1Q5UIP0 2472 aaKnown RBP9.67□□□□□ -0.86
NDE1-212ENST00000577101 HEATR9A2RTY3 570 aa9.67□□□□□ -0.86
NDE1-212ENST00000577101 FAM187AA6NFU0 413 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms