RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 COX14Q96I36 57 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 HIC2Q96JB3 615 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 VPS35Q96QK1 796 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 EBNA1BP2Q99848 306 aaKnown RBP8.5□□□□□ -1.05
NUP88-211ENST00000575976 RTKNQ9BST9 563 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 NUSAP1Q9BXS6 441 aaKnown RBP8.5□□□□□ -1.05
NUP88-211ENST00000575976 WDR26Q9H7D7 661 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 CAAP1Q9H8G2 361 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 ARFGAP3Q9NP61 516 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 PARD6AQ9NPB6 346 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 PHPT1Q9NRX4 125 aaPredicted RBP8.5□□□□□ -1.05
NUP88-211ENST00000575976 RALYQ9UKM9 306 aaKnown RBP8.5□□□□□ -1.05
NUP88-211ENST00000575976 CHMP2BQ9UQN3 213 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 ANKRD6Q9Y2G4 727 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 SNX11Q9Y5W9 270 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 TEX264Q9Y6I9 313 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 OAS3Q9Y6K5 1087 aaKnown RBP8.5□□□□□ -1.05
NUP88-211ENST00000575976 SLC30A1Q9Y6M5 507 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 RPS6KL1Q9Y6S9 549 aa8.5□□□□□ -1.05
NUP88-211ENST00000575976 FAM208BQ5VWN6 2430 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 SPTY2D1-AS1A0A0U1RR47 76 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 TMEM202A6NGA9 273 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 AGAP14A8MT82 685 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 CACNB4O00305 520 aaPredicted RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 EIF3HO15372 352 aaKnown RBP eCLIP8.49□□□□□ -1.05
NUP88-211ENST00000575976 MTX2O75431 263 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 USP1O94782 785 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 SLC25A14O95258 325 aaPredicted RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 VAPBO95292 243 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 ASMTLO95671 621 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 POLBP06746 335 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 MYCLP1P12525 358 aaPredicted RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 PGAM1P18669 254 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 ITGALP20701 1170 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 TGM1P22735 817 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 ARNTP27540 789 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 FOXN2P32314 431 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 CTSKP43235 329 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 POLD2P49005 469 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 KIAA1024LP59773 190 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 PRAMEP78395 509 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 CACNG1Q06432 222 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 GRIK2Q13002 908 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 EIF2B5Q13144 721 aaKnown RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 NFATC2Q13469 925 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 PTK2BQ14289 1009 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 FZD2Q14332 565 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 SF3A2Q15428 464 aaKnown RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 SMAD1Q15797 465 aaKnown RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 KHDC1Q4VXA5 237 aaKnown RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 ZNF542PQ5EBM4 170 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 GPRC6AQ5T6X5 926 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 KCTD16Q68DU8 428 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 KIAA0930Q6ICG6 404 aaPredicted RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 PSAPL1Q6NUJ1 521 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 DOK6Q6PKX4 331 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 AFTPHQ6ULP2 937 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 MACC1Q6ZN28 852 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 UNC5AQ6ZN44 842 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 SNX20Q7Z614 316 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 CCDC25Q86WR0 208 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 DCP2Q8IU60 420 aaKnown RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 PIANPQ8IYJ0 282 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 ZBED8Q8IZ13 594 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 PNPLA1Q8N8W4 532 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 OR6P1Q8NGX9 317 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 OR4L1Q8NH43 312 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 TSACCQ96A04 125 aaPredicted RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 CFAP36Q96G28 342 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 WDR92Q96MX6 357 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 FOXP3Q9BZS1 431 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 ANKZF1Q9H8Y5 726 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 PLAC1Q9HBJ0 212 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 TRIM39Q9HCM9 518 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 SAYSD1Q9NPB0 183 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 MRPL40Q9NQ50 206 aaKnown RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 SEMA4GQ9NTN9 838 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 SMOXQ9NWM0 555 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 IL1RAPL1Q9NZN1 696 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 MTRF1LQ9UGC7 380 aaKnown RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 ZC3H7BQ9UGR2 993 aaKnown RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.49□□□□□ -1.05
NUP88-211ENST00000575976 CRLS1Q9UJA2 301 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 CDV3Q9UKY7 258 aaKnown RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 PNMA8BQ9ULN7 279 aaPredicted RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 NFU1Q9UMS0 254 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 TMEM98Q9Y2Y6 226 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 FAM169AQ9Y6X4 670 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 V9GYY5 206 aaPredicted RBP8.49□□□□□ -1.05
NUP88-211ENST00000575976 SCN8AQ9UQD0 1980 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 SDK1Q7Z5N4 2213 aa8.49□□□□□ -1.05
NUP88-211ENST00000575976 SPAG17Q6Q759 2223 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 TRBV5-4A0A0C4DH59 114 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 GOLGA8KD6RF30 607 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 GOLGA8TH3BQL2 631 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 ARHGAP33O14559 1287 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 SCAMP1O15126 338 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 LRP3O75074 770 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 TTC4O95801 387 aa8.48□□□□□ -1.05
NUP88-211ENST00000575976 FUCA1P04066 466 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms