RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, human

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFAP4-206	ENST00000575320	PTPN2	P17706	415 aa		13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	UBA1	P22314	1058 aa	Known RBP	13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	CDH13	P55290	713 aa		13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	MADCAM1	Q13477	382 aa		13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	BBS12	Q6ZW61	710 aa		13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	RALGPS2	Q86X27	583 aa	Predicted RBP	13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	NAT16	Q8N8M0	369 aa		13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	DNAJC28	Q9NX36	388 aa		13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	DUS2	Q9NX74	493 aa	Known RBP	13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	OAS3	Q9Y6K5	1087 aa	Known RBP	13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	TM7SF2	O76062	418 aa		13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	RPL9	P32969	192 aa	Known RBP	13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	DGKE	P52429	567 aa		13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	RPL7A	P62424	266 aa	Known RBP	13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	OR10G6	Q8NH81	332 aa		13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	HDAC10	Q969S8	669 aa		13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	C18orf25	Q96B23	403 aa	Predicted RBP	13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	FRMD6	Q96NE9	622 aa		13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	WDR18	Q9BV38	432 aa		13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320	ATP13A3	Q9H7F0	1226 aa		13.9	□□□□□ -0.18
TFAP4-206	ENST00000575320		E7ENX8	843 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	METTL18	O95568	372 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	IFNG	P01579	166 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	CTPS1	P17812	591 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	PPIB	P23284	216 aa	Known RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	SULT2A1	Q06520	285 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	CLNK	Q7Z7G1	428 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	ADGRG2	Q8IZP9	1017 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	RBM15B	Q8NDT2	890 aa	Known RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	PIK3C3	Q8NEB9	887 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	C11orf24	Q96F05	449 aa	Predicted RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	DIRAS2	Q96HU8	199 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	TRNT1	Q96Q11	434 aa	Known RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	LMAN2L	Q9H0V9	348 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	EXD2	Q9NVH0	621 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	PLLP	Q9Y342	182 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	ZNF780B	Q9Y6R6	833 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	TRAFD1	O14545	582 aa	Predicted RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	PRODH	O43272	600 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	PDPR	Q8NCN5	879 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	OR8H1	Q8NGG4	311 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	CLHC1	Q8NHS4	586 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	NMUR2	Q9GZQ4	415 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	TBC1D24	Q9ULP9	559 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	PRKAB1	Q9Y478	270 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	DUSP11	O75319	330 aa	Known RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	TRIM3	O75382	744 aa	Predicted RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	FAM155B	O75949	473 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	GJA8	P48165	433 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	PSMD8	P48556	350 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	POU5F1	Q01860	360 aa	Known RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	CAMK1	Q14012	370 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	ERICH5	Q6P6B1	374 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	LRRC55	Q6ZSA7	311 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	HM13	Q8TCT9	377 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	LRRC4C	Q9HCJ2	640 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320		H0Y858	1186 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	POLR2J	P52435	117 aa	Known RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	LACTB2	Q53H82	288 aa	Predicted RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	TNFAIP8L3	Q5GJ75	292 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	NETO2	Q8NC67	525 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	SETD7	Q8WTS6	366 aa	Known RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	TM6SF2	Q9BZW4	377 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	MED28	Q9H204	178 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	FBXO5	Q9UKT4	447 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	SLC27A5	Q9Y2P5	690 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	MCIDAS	D6RGH6	385 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	MDM4	O15151	490 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	CYP3A4	P08684	503 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	MC4R	P32245	332 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	MNDA	P41218	407 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	MAPK8	P45983	427 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	CCNH	P51946	323 aa	Predicted RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	ARFIP1	P53367	373 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	RGS1	Q08116	209 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	CRHR2	Q13324	411 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	SIM2	Q14190	667 aa	Predicted RBP	13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	LIN52	Q52LA3	116 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	LCN1P1	Q5VSP4	162 aa		13.89	□□□□□ -0.19
TFAP4-206	ENST00000575320	PLK4	O00444	970 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	PER2	O15055	1255 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	KLRC4	O43908	158 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	CCNE2	O96020	404 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	LYN	P07948	512 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	NOMO3	P69849	1222 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	GTF2B	Q00403	316 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	TMPRSS11A	Q6ZMR5	421 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	SUN5	Q8TC36	379 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	CCDC115	Q96NT0	180 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	FERD3L	Q96RJ6	166 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	COPS4	Q9BT78	406 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	VWA7	Q9Y334	891 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	CEMIP	Q8WUJ3	1361 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	SAGE2P	A6NJ88	616 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	ZNF432	O94892	652 aa		13.88	□□□□□ -0.19
TFAP4-206	ENST00000575320	LPO	P22079	712 aa	Predicted RBP	13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms