RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 DAAM2Q86T65 1068 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 C17orf82Q86X59 251 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 PHYKPLQ8IUZ5 450 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 TC2NQ8N9U0 490 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 CCDC112Q8NEF3 446 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 OR10G6Q8NH81 332 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 GDAP1Q8TB36 358 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 SLC37A2Q8TED4 501 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 USP7Q93009 1102 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 RBM41Q96IZ5 413 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 CCDC74BQ96LY2 380 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 TRIB3Q96RU7 358 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 WDR24Q96S15 920 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 CCNL2Q96S94 520 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 ZSCAN5AQ9BUG6 496 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 OR2AG1Q9H205 316 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 RMI1Q9H9A7 625 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 MAGEE1Q9HCI5 957 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 TFR2Q9UP52 801 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 ALG6Q9Y672 507 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 GCN1Q92616 2671 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 AHCTF1Q8WYP5 2266 aa9.56□□□□□ -0.88
NPLOC4-212ENST00000573328 FASNP49327 2511 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 hCG_1818297A0A087WSY0 165 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 IGHV1OR21-1A0A087WYE8 117 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 IGHV5-10-1A0A0J9YXX1 117 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 TK2O00142 265 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 HGSO14964 777 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 NVLO15381 856 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 MTSS1O43312 755 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 NUAK1O60285 661 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 ZRANB2O95218 330 aaKnown RBP eCLIP9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 NDST3O95803 873 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 MPSTP25325 297 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 CD1CP29017 333 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 CSF2RBP32927 897 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 CSTF2P33240 577 aaKnown RBP eCLIP9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 MARCKSL1P49006 195 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 DCDC1P59894 354 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 GPLD1P80108 840 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 NFATC2Q13469 925 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 TCEAL1Q15170 157 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 TGIF1Q15583 401 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 SLC14A2Q15849 920 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 CLPPQ16740 277 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 SNAP47Q5SQN1 464 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 MANEAQ5SRI9 462 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 ZNF648Q5T619 568 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 KIAA1614Q5VZ46 1190 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 C11orf63Q6NUN7 778 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 SLC9B2Q86UD5 537 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 FAM129CQ86XR2 697 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 CCDC170Q8IYT3 715 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 KATNAL2Q8IYT4 538 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 TRAM1L1Q8N609 369 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 GPR26Q8NDV2 337 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 OR4D9Q8NGE8 314 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 TEKT5Q96M29 485 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 DPYSL5Q9BPU6 564 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 FERMT1Q9BQL6 677 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 HERPUD2Q9BSE4 406 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 FSD1LQ9BXM9 530 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 CARD9Q9H257 536 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 BPIFA1Q9NP55 256 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 KLC4Q9NSK0 619 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 FOXJ2Q9P0K8 574 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 ATXN10Q9UBB4 475 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 TBC1D29Q9UFV1 150 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 FAM153AQ9UHL3 310 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 RSPH14Q9UHP6 348 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 CNOT6Q9ULM6 557 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 PCDHB11Q9Y5F2 797 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 PCDHA13Q9Y5I0 950 aa9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 PCYT1BQ9Y5K3 369 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-212ENST00000573328 A8MU76 341 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 PDZK1P1A8MUH7 402 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 H7C0C1 242 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 K7ENP7 123 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 MTX2O75431 263 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 EML2O95834 649 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 THRAP10827 490 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 CCL4P13236 92 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 F3P13726 295 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 ZNF8P17098 575 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 CTNNA2P26232 953 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 FASLGP48023 281 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 ATP5OP48047 213 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 LIMK2P53671 638 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 HADHBP55084 474 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 TRA2AQ13595 282 aaKnown RBP eCLIP9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 GTF2H3Q13889 308 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 SEPT7Q16181 437 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 PDPK2PQ6A1A2 396 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 INO80CQ6PI98 192 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 ZNF574Q6ZN55 896 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 PID1Q7Z2X4 250 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 GLT6D1Q7Z4J2 308 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 TMC3Q7Z5M5 1100 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 VASH2Q86V25 355 aa9.54□□□□□ -0.88
NPLOC4-212ENST00000573328 LRRTM4Q86VH4 590 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms