RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 IGFBP2P18065 325 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 SPAM1P38567 509 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 TSFMP43897 325 aaKnown RBP6.84□□□□□ -1.31
CHD3-213ENST00000571249 GNPDA1P46926 289 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 VAV2P52735 878 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 RRADP55042 308 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 CTBSQ01459 385 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 PCOLCEQ15113 449 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 C3AR1Q16581 482 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 ALFQ53S48 1182 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 PWWP2BQ6NUJ5 590 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 RETSATQ6NUM9 610 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 ADGRD1Q6QNK2 874 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 SPOCD1Q6ZMY3 1216 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 C11orf57Q6ZUT1 292 aaPredicted RBP6.84□□□□□ -1.31
CHD3-213ENST00000571249 PPP1R3BQ86XI6 285 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 CEP57L1Q8IYX8 460 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 LILRB2Q8N423 598 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 OR7D4Q8NG98 312 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 TAS1R2Q8TE23 839 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 TM9SF4Q92544 642 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 PMM1Q92871 262 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 VOPP1Q96AW1 172 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 FAM149B1Q96BN6 582 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 TRIM44Q96DX7 344 aaPredicted RBP6.84□□□□□ -1.31
CHD3-213ENST00000571249 SGSM3Q96HU1 749 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 EAF1Q96JC9 268 aaPredicted RBP6.84□□□□□ -1.31
CHD3-213ENST00000571249 COX4I2Q96KJ9 171 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 DNAJC7Q99615 494 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 WDR77Q9BQA1 342 aaPredicted RBP6.84□□□□□ -1.31
CHD3-213ENST00000571249 PLA2G12AQ9BZM1 189 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 NAT10Q9H0A0 1025 aaKnown RBP6.84□□□□□ -1.31
CHD3-213ENST00000571249 RAB6BQ9NRW1 208 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 HOOK1Q9UJC3 728 aaKnown RBP6.84□□□□□ -1.31
CHD3-213ENST00000571249 FOXD3Q9UJU5 478 aaPredicted RBP6.84□□□□□ -1.31
CHD3-213ENST00000571249 TINAGQ9UJW2 476 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 SYNJ2BP-COX16A0A087WUM0 186 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 H7C1Q1 480 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 PHF1O43189 567 aaPredicted RBP6.83□□□□□ -1.32
CHD3-213ENST00000571249 BUB1BO60566 1050 aaPredicted RBP6.83□□□□□ -1.32
CHD3-213ENST00000571249 ZMPSTE24O75844 475 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 FBXO21O94952 628 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 ZWINTO95229 277 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 TPM3P06753 285 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 HOXC4P09017 264 aaPredicted RBP6.83□□□□□ -1.32
CHD3-213ENST00000571249 ESRRAP11474 423 aaPredicted RBP6.83□□□□□ -1.32
CHD3-213ENST00000571249 XPAP23025 273 aaPredicted RBP6.83□□□□□ -1.32
CHD3-213ENST00000571249 CDC25BP30305 580 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 ACTR1BP42025 376 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 FASLGP48023 281 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 MASP1P48740 699 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 LIG3P49916 1009 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 GFERP55789 205 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 ACTR1AP61163 376 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 PITX1P78337 314 aaPredicted RBP6.83□□□□□ -1.32
CHD3-213ENST00000571249 SLC20A2Q08357 652 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 NFATC2Q13469 925 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 PEX6Q13608 980 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 KCNAB1Q14722 419 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 MYBPC3Q14896 1274 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 MYLK3Q32MK0 819 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 KRTAP24-1Q3LI83 254 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 C1orf220Q5T0J3 134 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.83□□□□□ -1.32
CHD3-213ENST00000571249 FAM180AQ6UWF9 173 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 GDPD4Q6W3E5 623 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 LUZP1Q86V48 1076 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 C12orf56Q8IXR9 622 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 CBARPQ8N350 705 aaPredicted RBP6.83□□□□□ -1.32
CHD3-213ENST00000571249 GALNT16Q8N428 558 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 TTC39CQ8N584 583 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 UBR7Q8N806 425 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 BCORP1Q8N888 145 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 DNAAF3Q8N9W5 541 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 CCDC150Q8NCX0 1101 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 SLC35F5Q8WV83 523 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 CNDP1Q96KN2 507 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 C9orf72Q96LT7 481 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 TAAR6Q96RI8 345 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 OSBPL1AQ9BXW6 950 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 NPHS2Q9NP85 383 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 TRNAU1APQ9NX07 287 aaKnown RBP6.83□□□□□ -1.32
CHD3-213ENST00000571249 COX16Q9P0S2 106 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 SNX7Q9UNH6 387 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 ZNF281Q9Y2X9 895 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 HS3ST4Q9Y661 456 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 TENM1Q9UKZ4 2725 aa6.83□□□□□ -1.32
CHD3-213ENST00000571249 HMGB1P1B2RPK0 211 aaPredicted RBP6.82□□□□□ -1.32
CHD3-213ENST00000571249 O00370 1275 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 PDE2AO00408 941 aaPredicted RBP6.82□□□□□ -1.32
CHD3-213ENST00000571249 TEX33O43247 280 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 ZNF500O60304 480 aaPredicted RBP6.82□□□□□ -1.32
CHD3-213ENST00000571249 LILRA1O75019 489 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 CTAG2O75638 210 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 POP4O95707 220 aaKnown RBP6.82□□□□□ -1.32
CHD3-213ENST00000571249 IL2RAP01589 272 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 IGLV3-25P01717 112 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 CEACAM5P06731 702 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 SLC2A3P11169 496 aa6.82□□□□□ -1.32
CHD3-213ENST00000571249 MST1P26927 711 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms