RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 GPR17Q13304 367 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 DPYSL2Q16555 572 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 WDR72Q3MJ13 1102 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 FAM69AQ5T7M9 428 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 KRT39Q6A163 491 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 DARS2Q6PI48 645 aaKnown RBP6.64□□□□□ -1.35
SMG1-217ENST00000569764 FBXO38Q6PIJ6 1188 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 ANO5Q75V66 913 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 ZNF227Q86WZ6 799 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 CLHC1Q8NHS4 586 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 IFI44Q8TCB0 444 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 CITED1Q99966 193 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 GTPBP2Q9BX10 602 aaKnown RBP6.64□□□□□ -1.35
SMG1-217ENST00000569764 RAD18Q9NS91 495 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 C5AR2Q9P296 337 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 SHOXO15266 292 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 CTSEP14091 401 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 CPA3P15088 417 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 CYP2A7P20853 494 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 ADAM9Q13443 819 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 SEMA5AQ13591 1074 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 SMU1Q2TAY7 513 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 ASTE1Q2TB18 679 aaPredicted RBP6.63□□□□□ -1.35
SMG1-217ENST00000569764 ZACNQ401N2 412 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 CYP27C1Q4G0S4 372 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 LYSMD4Q5XG99 296 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 CHST15Q7LFX5 561 aaPredicted RBP6.63□□□□□ -1.35
SMG1-217ENST00000569764 SLC35F6Q8N357 371 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 TTC29Q8NA56 475 aaPredicted RBP6.63□□□□□ -1.35
SMG1-217ENST00000569764 TRPC4APQ8TEL6 797 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 TANKQ92844 425 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 SPACA9Q96E40 222 aaPredicted RBP6.63□□□□□ -1.35
SMG1-217ENST00000569764 TMEM68Q96MH6 324 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 FAM111AQ96PZ2 611 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 ACBD6Q9BR61 282 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 SPXQ9BT56 116 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 NXF3Q9H4D5 531 aaKnown RBP6.63□□□□□ -1.35
SMG1-217ENST00000569764 NHEJ1Q9H9Q4 299 aaPredicted RBP6.63□□□□□ -1.35
SMG1-217ENST00000569764 SIX2Q9NPC8 291 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 DECR2Q9NUI1 292 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 TDP1Q9NUW8 608 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 ADAM21Q9UKJ8 722 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 YIPF1Q9Y548 306 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 CEP290O15078 2479 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 A0A1B0GVG6 124 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 PRR23AA6NEV1 266 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 RFXAPO00287 272 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 GSNP06396 782 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 RHOP08100 348 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 GSTT2P0CG29 244 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 GSTT2BP0CG30 244 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 ITGB6P18564 788 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 AKAP5P24588 427 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 MC4RP32245 332 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 TMED10P49755 219 aaKnown RBP6.63□□□□□ -1.35
SMG1-217ENST00000569764 ZNF135P52742 658 aaPredicted RBP6.63□□□□□ -1.35
SMG1-217ENST00000569764 PRRX1P54821 245 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 LRRC63Q05C16 580 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 BTKQ06187 659 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 ENPEPQ07075 957 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 KNOP1Q1ED39 458 aaKnown RBP6.63□□□□□ -1.35
SMG1-217ENST00000569764 KLHDC10Q6PID8 442 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 ZNF720Q7Z2F6 126 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 HJURPQ8NCD3 748 aaPredicted RBP6.63□□□□□ -1.35
SMG1-217ENST00000569764 OR8D1Q8WZ84 308 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 CPB2Q96IY4 423 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 FGD4Q96M96 766 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 PPP1R2P1Q96PQ5 205 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 PPP1R10Q96QC0 940 aaKnown RBP6.63□□□□□ -1.35
SMG1-217ENST00000569764 TPK1Q9H3S4 243 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 LOXHD1Q8IVV2 1947 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 RNF103-CHMP3A0A140T963 221 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 WDR91A4D1P6 747 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 C2orf71A6NGG8 1288 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 PDLIM1O00151 329 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 RNF103O00237 685 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 PGRMC2O15173 223 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 BUB1BO60566 1050 aaPredicted RBP6.63□□□□□ -1.35
SMG1-217ENST00000569764 FYNP06241 537 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 BCAT1P54687 386 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 NR1D2Q14995 579 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 DHCR24Q15392 516 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 GPAT3Q53EU6 434 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 C1orf220Q5T0J3 134 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 C6orf163Q5TEZ5 329 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 HTR3DQ70Z44 454 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 TMPRSS9Q7Z410 1059 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 OOSP2Q86WS3 158 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 CHSY1Q86X52 802 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 KIF18BQ86Y91 864 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 EXD1Q8NHP7 514 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 ELSPBP1Q96BH3 223 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 CYFIP2Q96F07 1278 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 SERPINB11Q96P15 392 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 CINPQ9BW66 212 aaPredicted RBP6.63□□□□□ -1.35
SMG1-217ENST00000569764 FUT8Q9BYC5 575 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 SLC2A11Q9BYW1 496 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 GPR61Q9BZJ8 451 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 PCED1AQ9H1Q7 454 aa6.63□□□□□ -1.35
SMG1-217ENST00000569764 RXFP1Q9HBX9 757 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms