RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 NEFHP12036 1026 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 HOXB2P14652 356 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 ETV3P41162 512 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 PGGT1BP53609 377 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 CNTN1Q12860 1018 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 ACOX1Q15067 660 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 ZNF284Q2VY69 593 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 HSF5Q4G112 596 aaPredicted RBP12.51□□□□□ -0.41
GGA2-213ENST00000568922 ATP13A5Q4VNC0 1218 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 SLC44A4Q53GD3 710 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 CTSL3PQ5NE16 218 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 HENMT1Q5T8I9 393 aaKnown RBP12.51□□□□□ -0.41
GGA2-213ENST00000568922 PIP5KL1Q5T9C9 394 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 AGAP9Q5VTM2 703 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 UGT3A1Q6NUS8 523 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 TXNDC5Q8NBS9 432 aaKnown RBP12.51□□□□□ -0.41
GGA2-213ENST00000568922 RAB3IL1Q8TBN0 382 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 RDH11Q8TC12 318 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 BCAS4Q8TDM0 211 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 FAM3CQ92520 227 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 ZNF75CPQ92670 426 aaPredicted RBP12.51□□□□□ -0.41
GGA2-213ENST00000568922 KCNJ9Q92806 393 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 UBXN10Q96LJ8 280 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 COQ10AQ96MF6 247 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 ZSCAN5AQ9BUG6 496 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 SPATA16Q9BXB7 569 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 NSRP1Q9H0G5 558 aaKnown RBP12.51□□□□□ -0.41
GGA2-213ENST00000568922 SMOXQ9NWM0 555 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 ZDHHC3Q9NYG2 299 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 CD84Q9UIB8 345 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 GNPTGQ9UJJ9 305 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 LRRK1Q38SD2 2015 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 PLK4O00444 970 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 MAN2B1O00754 1011 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 MID1O15344 667 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 AP1G1O43747 822 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 CCDC166P0CW27 439 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 CA5AP35218 305 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 SKIV2L2P42285 1042 aaKnown RBP12.51□□□□□ -0.41
GGA2-213ENST00000568922 NSG1P42857 185 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 COPAP53621 1224 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 RPS14P62263 151 aaKnown RBP12.51□□□□□ -0.41
GGA2-213ENST00000568922 IRX4P78413 519 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 TIAL1Q01085 375 aaKnown RBP eCLIP12.51□□□□□ -0.413e-14■■■■■ 40.5
GGA2-213ENST00000568922 CREB5Q02930 508 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 LRRC8EQ6NSJ5 796 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 KLC3Q6P597 504 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 ZNF765Q7L2R6 523 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 CPLX4Q7Z7G2 160 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 PIM3Q86V86 326 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 NUDCD3Q8IVD9 361 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 LRRC34Q8IZ02 419 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 CXorf40AQ8TE69 158 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 NXNL1Q96CM4 212 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 DTD2Q96FN9 168 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 SCYL1Q96KG9 808 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 GPR78Q96P69 363 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 CCT8L2Q96SF2 557 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 COPS8Q99627 209 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 WRAP53Q9BUR4 548 aaKnown RBP12.51□□□□□ -0.41
GGA2-213ENST00000568922 MANSC1Q9H8J5 431 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 IGSF5Q9NSI5 407 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 SIRPGQ9P1W8 387 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 COPG2Q9UBF2 871 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 MED16Q9Y2X0 877 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 FADS3Q9Y5Q0 445 aa12.51□□□□□ -0.41
GGA2-213ENST00000568922 OAS3Q9Y6K5 1087 aaKnown RBP12.51□□□□□ -0.41
GGA2-213ENST00000568922 BRWD1Q9NSI6 2320 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 E5RI56 91 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 KLF11O14901 512 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 DNAJC6O75061 913 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 ADAM23O75077 832 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 CPA3P15088 417 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 IL9P15248 144 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 ZNF37AP17032 561 aaPredicted RBP12.5□□□□□ -0.41
GGA2-213ENST00000568922 GM2AP17900 193 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 DRD4P21917 467 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 DRD3P35462 400 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 DLG1Q12959 904 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 CSHL1Q14406 222 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 EOGTQ5NDL2 527 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 IER5LQ5T953 404 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 PTRHD1Q6GMV3 140 aaKnown RBP12.5□□□□□ -0.41
GGA2-213ENST00000568922 KIAA1211LQ6NV74 962 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 MACC1Q6ZN28 852 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 FSTL5Q8N475 847 aaPredicted RBP12.5□□□□□ -0.41
GGA2-213ENST00000568922 HDDC3Q8N4P3 179 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 AADATQ8N5Z0 425 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 HEXDCQ8WVB3 486 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 SCAMP4Q969E2 229 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 AP2M1Q96CW1 435 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 ERLEC1Q96DZ1 483 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 VPS35Q96QK1 796 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 RIOK2Q9BVS4 552 aaKnown RBP12.5□□□□□ -0.41
GGA2-213ENST00000568922 BOCQ9BWV1 1114 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 ABCG8Q9H221 673 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 TRMT6Q9UJA5 497 aaKnown RBP12.5□□□□□ -0.41
GGA2-213ENST00000568922 DUSP12Q9UNI6 340 aa12.5□□□□□ -0.41
GGA2-213ENST00000568922 IGLV3-16A0A075B6K0 115 aa12.49□□□□□ -0.41
GGA2-213ENST00000568922 A0A1W2PQF6 199 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms