RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 CRLS1Q9UJA2 301 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 CHMP2BQ9UQN3 213 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 TMEM98Q9Y2Y6 226 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 OAS3Q9Y6K5 1087 aaKnown RBP16.6■□□□□ 0.25
COMMD4-224ENST00000568877 ZCWPW2A0A1B0GU75 182 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 LNP1A1A4G5 178 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 TNFRSF10CO14798 259 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 FOXD2O60548 495 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-224ENST00000568877 VAPBO95292 243 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 ASMTLO95671 621 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 TTC4O95801 387 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 CEACAM5P06731 702 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 ARNTP27540 789 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 FOXN2P32314 431 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 POLD2P49005 469 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 CARSP49589 748 aaKnown RBP16.59■□□□□ 0.25
COMMD4-224ENST00000568877 CUL1Q13616 776 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 HLTFQ14527 1009 aaKnown RBP eCLIP16.59■□□□□ 0.25
COMMD4-224ENST00000568877 ZNF423Q2M1K9 1284 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 LDLRAP1Q5SW96 308 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 PRAMEF14Q5SWL7 426 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 GPRC6AQ5T6X5 926 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 DOK6Q6PKX4 331 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 PRR23CQ6ZRP0 262 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 TAS2R42Q7RTR8 314 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 ANKMY2Q8IV38 441 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 OXR1Q8N573 874 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 DDHD1Q8NEL9 900 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 GDAP1Q8TB36 358 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 ELF4Q99607 663 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-224ENST00000568877 WDR83Q9BRX9 315 aaKnown RBP16.59■□□□□ 0.25
COMMD4-224ENST00000568877 TRIM39Q9HCM9 518 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 FGF22Q9HCT0 170 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 SAYSD1Q9NPB0 183 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 DNAJC28Q9NX36 388 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 KLQ9UEF7 1012 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 MTRF1LQ9UGC7 380 aaKnown RBP16.59■□□□□ 0.25
COMMD4-224ENST00000568877 ZC3H7BQ9UGR2 993 aaKnown RBP16.59■□□□□ 0.25
COMMD4-224ENST00000568877 SLC17A4Q9Y2C5 497 aa16.59■□□□□ 0.25
COMMD4-224ENST00000568877 GON4LQ3T8J9 2241 aa16.58■□□□□ 0.25
COMMD4-224ENST00000568877 TRBV5-4A0A0C4DH59 114 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 DFNA5O60443 496 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 GFRA3O60609 400 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 CER1O95813 267 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 CSF2P04141 144 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 PRSS56P0CW18 603 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 RXRGP48443 463 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 ARCN1P48444 511 aaKnown RBP16.58■□□□□ 0.24
COMMD4-224ENST00000568877 CDKN1CP49918 316 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-224ENST00000568877 ATXN3P54252 364 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-224ENST00000568877 SRP54P61011 504 aaKnown RBP16.58■□□□□ 0.24
COMMD4-224ENST00000568877 PPARDQ03181 441 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 CRYMQ14894 314 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 FASTKD3Q14CZ7 662 aaKnown RBP16.58■□□□□ 0.24
COMMD4-224ENST00000568877 ALG11Q2TAA5 492 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 FASTKD1Q53R41 847 aaKnown RBP16.58■□□□□ 0.24
COMMD4-224ENST00000568877 ZNF542PQ5EBM4 170 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 SPANXN3Q5MJ09 141 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 ZNF648Q5T619 568 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-224ENST00000568877 PSAPL1Q6NUJ1 521 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 ADGRG6Q86SQ4 1221 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 SERPINA9Q86WD7 417 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 CCDC25Q86WR0 208 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 PIANPQ8IYJ0 282 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 ZBED8Q8IZ13 594 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 NXPE1Q8N323 547 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 GPR161Q8N6U8 529 aaKnown RBP16.58■□□□□ 0.24
COMMD4-224ENST00000568877 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.58■□□□□ 0.24
COMMD4-224ENST00000568877 FBXO36Q8NEA4 188 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 OR1E3Q8WZA6 343 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.58■□□□□ 0.24
COMMD4-224ENST00000568877 TSACCQ96A04 125 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-224ENST00000568877 GAREM1Q9H706 876 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 VPS18Q9P253 973 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 ATXN10Q9UBB4 475 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 KLF15Q9UIH9 416 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 PNMA8BQ9ULN7 279 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-224ENST00000568877 FAM169AQ9Y6X4 670 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 ZNF106Q9H2Y7 1883 aaKnown RBP16.58■□□□□ 0.24
COMMD4-224ENST00000568877 GPR179Q6PRD1 2367 aa16.58■□□□□ 0.24
COMMD4-224ENST00000568877 PCDH15Q96QU1 1955 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 PRSS38A1L453 326 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 CD3EAPO15446 510 aaKnown RBP16.57■□□□□ 0.24
COMMD4-224ENST00000568877 VEGFDO43915 354 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 MTX2O75431 263 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 RASGRP1O95267 797 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 TNFP01375 233 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 FUCA1P04066 466 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 IVLP07476 585 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 NME1P15531 152 aaKnown RBP16.57■□□□□ 0.24
COMMD4-224ENST00000568877 ACRV1P26436 265 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 ECHS1P30084 290 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 ARRB1P49407 418 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-224ENST00000568877 BLKP51451 505 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 TMEM115Q12893 351 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-224ENST00000568877 LONRF1Q17RB8 773 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 KHDC1Q4VXA5 237 aaKnown RBP16.57■□□□□ 0.24
COMMD4-224ENST00000568877 LYPLAL1Q5VWZ2 237 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 KCTD16Q68DU8 428 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 UNC5AQ6ZN44 842 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms