RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 DUS2Q9NX74 493 aaKnown RBP16.68■□□□□ 0.26
CMTM3-213ENST00000566756 SLC8A2Q9UPR5 921 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 CRYL1Q9Y2S2 319 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 AK5Q9Y6K8 562 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 PTPRSQ13332 1948 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 ATP6AP2A0A1C7CYW4 349 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 TRIM64CA6NLI5 447 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 PIP5K1BO14986 540 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 ATP6AP2O75787 350 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 CDH2P19022 906 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-213ENST00000566756 DEFB103AP81534 67 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 PRKCQQ04759 706 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 LCP2Q13094 533 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 KCTD21Q4G0X4 260 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 KRT80Q6KB66 452 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 CYP2R1Q6VVX0 501 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 CAMK1DQ8IU85 385 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 SLC15A3Q8IY34 581 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 CANT1Q8WVQ1 401 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 IGSF8Q969P0 613 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 RMND5BQ96G75 393 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-213ENST00000566756 CCT7Q99832 543 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 SEMA3CQ99985 751 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 OLAHQ9NV23 265 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 SLC27A5Q9Y2P5 690 aa16.67■□□□□ 0.26
CMTM3-213ENST00000566756 CCDC162PA2VCL2 907 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 LCHNA4D1U4 455 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 OR51F1A6NGY5 319 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 FXYD1O00168 92 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 NR5A2O00482 541 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 BMP10O95393 424 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 GPIP06744 558 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 PRR35P0CG20 571 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 FCGR1AP12314 374 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 LAG3P18627 525 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 ATP6V1B2P21281 511 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 IL10P22301 178 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 GRIA3P42263 894 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 TUFMP49411 452 aaKnown RBP16.66■□□□□ 0.26
CMTM3-213ENST00000566756 CDH13P55290 713 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 DUSP4Q13115 394 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 OR4D1Q15615 310 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 BLOC1S3Q6QNY0 202 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 LAYNQ6UX15 382 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 AMIGO2Q86SJ2 522 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 TRIML2Q8N7C3 387 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 PPWD1Q96BP3 646 aaKnown RBP16.66■□□□□ 0.26
CMTM3-213ENST00000566756 DNAJC1Q96KC8 554 aaKnown RBP16.66■□□□□ 0.26
CMTM3-213ENST00000566756 CIB1Q99828 191 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 TTLL2Q9BWV7 592 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 CLK4Q9HAZ1 481 aaKnown RBP16.66■□□□□ 0.26
CMTM3-213ENST00000566756 SLC52A3Q9NQ40 469 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 PFDN4Q9NQP4 134 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 TLR8Q9NR97 1041 aaKnown RBP16.66■□□□□ 0.26
CMTM3-213ENST00000566756 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.66■□□□□ 0.26
CMTM3-213ENST00000566756 GMIPQ9P107 970 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 KCTD3Q9Y597 815 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 DHRS12A0PJE2 317 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 CCDC160A6NGH7 325 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 ZNF839A8K0R7 811 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 SYCE1LA8MT33 242 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 STX16O14662 325 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 NDST3O95803 873 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 CAPN3P20807 821 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 CD9P21926 228 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 PSMA4P25789 261 aaKnown RBP16.66■□□□□ 0.26
CMTM3-213ENST00000566756 PTRH1Q86Y79 214 aaKnown RBP16.66■□□□□ 0.26
CMTM3-213ENST00000566756 FBXO32Q969P5 355 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 TMEM169Q96HH4 297 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 SEPT5Q99719 369 aaPredicted RBP16.66■□□□□ 0.26
CMTM3-213ENST00000566756 PDFQ9HBH1 243 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 AGPAT4Q9NRZ5 378 aa16.66■□□□□ 0.26
CMTM3-213ENST00000566756 NLE1Q9NVX2 485 aaPredicted RBP16.66■□□□□ 0.26
CMTM3-213ENST00000566756 KIAA1671Q9BY89 1806 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 KANSL1LA0AUZ9 987 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 TTC24A2A3L6 582 aaPredicted RBP16.65■□□□□ 0.26
CMTM3-213ENST00000566756 UBXN8O00124 270 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 AKAP10O43572 662 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 KLK8O60259 260 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 CLASP2O75122 1294 aaKnown RBP16.65■□□□□ 0.26
CMTM3-213ENST00000566756 TIPRLO75663 272 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 SLC4A1P02730 911 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 SERPINF2P08697 491 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 RPS17P08708 135 aaKnown RBP16.65■□□□□ 0.26
CMTM3-213ENST00000566756 TSPAN8P19075 237 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 OR1D2P34982 312 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 CDK9P50750 372 aaKnown RBP16.65■□□□□ 0.26
CMTM3-213ENST00000566756 KPNA1P52294 538 aaPredicted RBP16.65■□□□□ 0.26
CMTM3-213ENST00000566756 NME5P56597 212 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 CLCQ05315 142 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 EFEMP1Q12805 493 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 ZNF235Q14590 738 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 PFKFB4Q16877 469 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 C5orf22Q49AR2 442 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 SPOUT1Q5T280 376 aaKnown RBP16.65■□□□□ 0.26
CMTM3-213ENST00000566756 TPGS2Q68CL5 300 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 KIAA1841Q6NSI8 718 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 TXNDC11Q6PKC3 985 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 ZNF354CQ86Y25 554 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 GPR65Q8IYL9 337 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms