RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	ATG2B	Q96BY7	2078 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	USP34	Q70CQ2	3546 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279		A0A0U1RQS6	177 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279		B2RBV5	119 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	CHUK	O15111	745 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	HOXC11	O43248	304 aa	Predicted RBP	10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	PI15	O43692	258 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	EGF	P01133	1207 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	PENK	P01210	267 aa	Predicted RBP	10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	CD1D	P15813	335 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	TFEB	P19484	476 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	CD70	P32970	193 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	SERPINB5	P36952	375 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	KCNC1	P48547	511 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	CDKN1C	P49918	316 aa	Predicted RBP	10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	SEC13	P55735	322 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	AP1S1	P61966	158 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	MPPE1	Q53F39	396 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	SEL1L3	Q68CR1	1132 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	CWF19L1	Q69YN2	538 aa	Known RBP	10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	RETSAT	Q6NUM9	610 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	ISCA2	Q86U28	154 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	KDM1B	Q8NB78	822 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	RBM15B	Q8NDT2	890 aa	Known RBP	10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	PTER	Q96BW5	349 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	OR52B2	Q96RD2	323 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	SHCBP1L	Q9BZQ2	653 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	TM6SF2	Q9BZW4	377 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	ALG9	Q9H6U8	611 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	CYP4F12	Q9HCS2	524 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	C11orf16	Q9NQ32	467 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	NCKIPSD	Q9NZQ3	722 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	MED16	Q9Y2X0	877 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	SCN8A	Q9UQD0	1980 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	TTC28	Q96AY4	2481 aa		10.08	□□□□□ -0.8
TCF4-231	ENST00000566279	TMEM221	A6NGB7	291 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279		E9PBE3	544 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279		M0R296	226 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	ZBTB14	O43829	449 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	KLHL41	O60662	606 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	IPO13	O94829	963 aa	Known RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	PGLS	O95336	258 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	CYBB	P04839	570 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	DCN	P07585	359 aa	Known RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	ZNF37A	P17032	561 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	GM2A	P17900	193 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	HLA-F	P30511	346 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	GEN1	Q17RS7	908 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279		Q6ZS52	159 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	PIANP	Q8IYJ0	282 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	PHTF2	Q8N3S3	785 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	FIBIN	Q8TAL6	211 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	PIH1D2	Q8WWB5	315 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	STON2	Q8WXE9	905 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	SORCS1	Q8WY21	1168 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	CCDC126	Q96EE4	140 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	MYO19	Q96H55	970 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	CNDP1	Q96KN2	507 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	LMLN	Q96KR4	655 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	TCF12	Q99081	682 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	P2RY13	Q9BPV8	354 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	OSBPL1A	Q9BXW6	950 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	DENND2D	Q9H6A0	471 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	WDR55	Q9H6Y2	383 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	BPIFA1	Q9NP55	256 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	HACD3	Q9P035	362 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	MARK1	Q9P0L2	795 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	VTI1B	Q9UEU0	232 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	INTS6	Q9UL03	887 aa	Known RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	RPL26L1	Q9UNX3	145 aa	Known RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	PLA2G4C	Q9UP65	541 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	ZNF711	Q9Y462	761 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	PCDHB9	Q9Y5E1	797 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	PRRT4	C9JH25	899 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	SLCO1B7	G3V0H7	640 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	STX7	O15400	261 aa	Known RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	ZNF821	O75541	412 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	SNUPN	O95149	360 aa	Known RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	JUN	P05412	331 aa	Known RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	GLUL	P15104	373 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	FMO4	P31512	558 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	MC4R	P32245	332 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	DGKG	P49619	791 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	PLK1	P53350	603 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	PEX6	Q13608	980 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	PLEKHG6	Q3KR16	790 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	SETMAR	Q53H47	684 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	WASHC2D	Q5SRD0	308 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	ARMC12	Q5T9G4	340 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	METTL21C	Q5VZV1	264 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	TMEM215	Q68D42	235 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	PSAPL1	Q6NUJ1	521 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	RALGPS2	Q86X27	583 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	TMPRSS6	Q8IU80	811 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	CAMK1D	Q8IU85	385 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	OR6K2	Q8NGY2	324 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	ACD	Q96AP0	544 aa		10.07	□□□□□ -0.8
TCF4-231	ENST00000566279	MCUR1	Q96AQ8	359 aa		10.07	□□□□□ -0.8

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