RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 TFDP2Q14188 446 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 NOMO1Q15155 1222 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 TGIF1Q15583 401 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 TFDP3Q5H9I0 405 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 ZNF569Q5MCW4 686 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.93□□□□□ -0.82
CMTM3-209ENST00000565003 C11orf63Q6NUN7 778 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 INO80CQ6PI98 192 aaPredicted RBP9.93□□□□□ -0.82
CMTM3-209ENST00000565003 KDELC1Q6UW63 502 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 ZC3H18Q86VM9 953 aaKnown RBP9.93□□□□□ -0.82
CMTM3-209ENST00000565003 KATNAL2Q8IYT4 538 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 SNRNP27Q8WVK2 155 aaKnown RBP9.93□□□□□ -0.82
CMTM3-209ENST00000565003 KRT35Q92764 455 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 CCDC74BQ96LY2 380 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 ANP32EQ9BTT0 268 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 SPATA16Q9BXB7 569 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 KCNK4Q9NYG8 393 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 TMEM9Q9P0T7 183 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 ATXN10Q9UBB4 475 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 NFKBIL1Q9UBC1 381 aaPredicted RBP9.93□□□□□ -0.82
CMTM3-209ENST00000565003 TBC1D29Q9UFV1 150 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 MGAQ8IWI9 3026 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 SOWAHDA6NJG2 315 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 C9orf172C9J069 976 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 ERVH48-1M5A8F1 160 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 TK2O00142 265 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 HGSO14964 777 aaPredicted RBP9.92□□□□□ -0.82
CMTM3-209ENST00000565003 EFSO43281 561 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 GRID2O43424 1007 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 MTX2O75431 263 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 ZRANB2O95218 330 aaKnown RBP eCLIP9.92□□□□□ -0.82
CMTM3-209ENST00000565003 SLC25A14O95258 325 aaPredicted RBP9.92□□□□□ -0.82
CMTM3-209ENST00000565003 THRAP10827 490 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 MPSTP25325 297 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 CHRNA4P43681 627 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 ZNF75DP51815 510 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 LIMK2P53671 638 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 MAPK10P53779 464 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 RHDQ02161 417 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 HHEXQ03014 270 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 SPA17Q15506 151 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 CLPPQ16740 277 aaPredicted RBP9.92□□□□□ -0.82
CMTM3-209ENST00000565003 KHDC1Q4VXA5 237 aaKnown RBP9.92□□□□□ -0.82
CMTM3-209ENST00000565003 CCDC81Q6ZN84 652 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 BZW1Q7L1Q6 419 aaKnown RBP9.92□□□□□ -0.82
CMTM3-209ENST00000565003 ADGRG6Q86SQ4 1221 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 ZFAND4Q86XD8 727 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 CCDC50Q8IVM0 306 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 CCDC170Q8IYT3 715 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 ZNF567Q8N184 647 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 TRAM1L1Q8N609 369 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 OR4D9Q8NGE8 314 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 TTC9Q92623 222 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 P3H4Q92791 437 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 USP7Q93009 1102 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 GLYATL1Q969I3 302 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 PMEPA1Q969W9 287 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 OXNAD1Q96HP4 312 aaPredicted RBP9.92□□□□□ -0.82
CMTM3-209ENST00000565003 QKIQ96PU8 341 aaKnown RBP eCLIP9.92□□□□□ -0.82
CMTM3-209ENST00000565003 HERPUD2Q9BSE4 406 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 ZSCAN5AQ9BUG6 496 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 GPR63Q9BZJ6 419 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 RBSNQ9H1K0 784 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 OR2AG1Q9H205 316 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 CARD9Q9H257 536 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 RMI1Q9H9A7 625 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 WDR70Q9NW82 654 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.92□□□□□ -0.82
CMTM3-209ENST00000565003 KLHL8Q9P2G9 620 aaPredicted RBP9.92□□□□□ -0.82
CMTM3-209ENST00000565003 FAM153AQ9UHL3 310 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 TMPRSS11EQ9UL52 423 aa9.92□□□□□ -0.82
CMTM3-209ENST00000565003 LOC285095A0A1B0GVY8 99 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 CHUKO15111 745 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 ZW10O43264 779 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 MTSS1O43312 755 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 SNX2O60749 519 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 NDUFA10O95299 355 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 LIPCP11150 499 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 F3P13726 295 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 FECHP22830 423 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 CTNNA1P35221 906 aaKnown RBP9.91□□□□□ -0.82
CMTM3-209ENST00000565003 CYLC1P35663 651 aaPredicted RBP9.91□□□□□ -0.82
CMTM3-209ENST00000565003 ARSDP51689 593 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 WNT3AP56704 352 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 GPLD1P80108 840 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 NFATC2Q13469 925 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 SQSTM1Q13501 440 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 TRA2AQ13595 282 aaKnown RBP eCLIP9.91□□□□□ -0.82
CMTM3-209ENST00000565003 PPP2R5EQ16537 467 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 PLA2G4EQ3MJ16 856 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 SIRPB2Q5JXA9 342 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 KIAA1614Q5VZ46 1190 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 PDPK2PQ6A1A2 396 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 IYDQ6PHW0 289 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 CRTC3Q6UUV7 619 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 BBS12Q6ZW61 710 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 DAAM2Q86T65 1068 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 PHYKPLQ8IUZ5 450 aa9.91□□□□□ -0.82
CMTM3-209ENST00000565003 RCOR2Q8IZ40 523 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms