RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ADCYAP1R1P41586 468 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 GLUD2P49448 558 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 BMXP51813 675 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 VGLL4Q14135 290 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 NOMO2Q5JPE7 1267 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 C9orf57Q5W0N0 161 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 OVOS1Q6IE37 1185 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 PRR23BQ6ZRT6 265 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 SMG8Q8ND04 991 aaKnown RBP12.54□□□□□ -0.4
COMMD4-209ENST00000564068 FLCNQ8NFG4 579 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 STYXQ8WUJ0 223 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 TOP1MTQ969P6 601 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 XYLT2Q9H1B5 865 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 SMURF2Q9HAU4 748 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 PDP1Q9P0J1 537 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-209ENST00000564068 ACTR3BQ9P1U1 418 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-209ENST00000564068 ELOVL7A1L3X0 281 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 YJEFN3A6XGL0 299 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 FAM25AB3EWG3 89 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 FAM25CB3EWG5 89 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 FAM25GB3EWG6 89 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 C9IYK1 514 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 NRP1O14786 923 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 OR4F21O95013 312 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 GSTM1P09488 218 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 FUT4P22083 530 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 GJA9P57773 515 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 LCP2Q13094 533 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 ZNF177Q13360 481 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-209ENST00000564068 PGM2L1Q6PCE3 622 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 DET1Q7L5Y6 550 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 GPR180Q86V85 440 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 LRRC52Q8N7C0 313 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 ZNF420Q8TAQ5 688 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-209ENST00000564068 GRIN3AQ8TCU5 1115 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 ADGRE3Q9BY15 652 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 HDHD2Q9H0R4 259 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 RAPGEFL1Q9UHV5 662 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 CCDC162PA2VCL2 907 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 NPEPPSL1A6NEC2 478 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 BMP10O95393 424 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 TSNQ15631 228 aaKnown RBP12.53□□□□□ -0.4
COMMD4-209ENST00000564068 ANKDD1AQ495B1 522 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 PPP4R4Q6NUP7 873 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 CCDC149Q6ZUS6 474 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 OR4L1Q8NH43 312 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 LINGO1Q96FE5 620 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 CDCA5Q96FF9 252 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 CCNB1IP1Q9NPC3 277 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 PIGVQ9NUD9 493 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 INTS10Q9NVR2 710 aaKnown RBP12.53□□□□□ -0.4
COMMD4-209ENST00000564068 TMEM9Q9P0T7 183 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 NUMBLQ9Y6R0 609 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 CICQ96RK0 1608 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-209ENST00000564068 CCDC182A6NF36 153 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 SERPIND1P05546 499 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 MAPK1P28482 360 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 SPATA19Q7Z5L4 167 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 ANKRD46Q86W74 232 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 PIK3C3Q8NEB9 887 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 KBTBD7Q8WVZ9 684 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 KAT8Q9H7Z6 458 aaKnown RBP12.53□□□□□ -0.4
COMMD4-209ENST00000564068 ADPRHL2Q9NX46 363 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 SPATA2Q9UM82 520 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 PPEF2O14830 753 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 PAGE1O75459 146 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 CD36P16671 472 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 NKX2-5P52952 324 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-209ENST00000564068 VBP1P61758 197 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 ZNF773Q6PK81 442 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 PLPPR4Q7Z2D5 763 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 KRT73Q86Y46 540 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 DCP1BQ8IZD4 617 aaKnown RBP12.53□□□□□ -0.4
COMMD4-209ENST00000564068 SPPL2BQ8TCT7 592 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 CENPIQ92674 756 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-209ENST00000564068 MYDGFQ969H8 173 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 PPP3R2Q96LZ3 170 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 KCNA7Q96RP8 456 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 GPR20Q99678 358 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 TOR3AQ9H497 397 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 EHD1Q9H4M9 534 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 TRPV5Q9NQA5 729 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 SACM1LQ9NTJ5 587 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 TMED5Q9Y3A6 229 aa12.53□□□□□ -0.4
COMMD4-209ENST00000564068 ALS2Q96Q42 1657 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 KRT87PA6NCN2 255 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 AURKAO14965 403 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 EPN2O95208 641 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 RAP2AP10114 183 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 MAGEA10P43363 369 aaPredicted RBP12.52□□□□□ -0.4
COMMD4-209ENST00000564068 CCT3P49368 545 aaKnown RBP12.52□□□□□ -0.4
COMMD4-209ENST00000564068 ACADVLP49748 655 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 ZNF135P52742 658 aaPredicted RBP12.52□□□□□ -0.4
COMMD4-209ENST00000564068 DGKQP52824 942 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 DSC2Q02487 901 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 MBTD1Q05BQ5 628 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 NFATC3Q12968 1075 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 NPTX1Q15818 432 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 RAP1GAP2Q684P5 730 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms